Gene Slin_1104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1104 
Symbol 
ID8724837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1352425 
End bp1354578 
Gene Length2154 bp 
Protein Length717 aa 
Translation table11 
GC content49% 
IMG OID 
Productaldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 
Protein accessionYP_003385954 
Protein GI284036024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.116008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.557281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGA TAGAGCATTC AAGTAGAAGA GGCTTTTTAA AAATAGCTGC GGCTACCGGT 
GGCGGACTTA TTTTAGGGTT TAACTGGTTT GAATCAGAGG CCGCAACGGC AAGTGCAGCT
GGTGTACCAG TCGCAGCAGG GGCTGACTTT AACAGTTACC TGTCTATCAA TCCCCAGGGT
ATAATTACTA TACTCTCTCC AAATCCAGAA GTCGGGCAAG GTATAAAAAC CGCTTTCCCG
ATTATCGTAG CAGAAGAGTT GGATGCCGAC TGGACTAAAG TAGTTGTAGA GCAGGCTCCC
CTTGACACAA AGAAGTTTGA ACGGCAGGTA GCCGGTGGTA GCGGATCAAT CCCTCACTCT
TGGGAACGAC TACGGAAAGC AGGCGCTACG GCCCGACAAA TGTTGGTAGG GGCGGCTGCT
AAGCGATGGA GCGTTCCGGG CTCGGAATGC ACAACCGAAA AAGGGTTTGT TATTCATTCC
GCCAGTAACC GGAAACTCAG TTATGGTGAA CTCGCTACAG AAGCGGCTCA ATTGCCCGTT
CCTACCGATG TAAAGCTCAA AGCTATAAAA GATTTCAAGC TCATTGGCAG TACGGTTAAA
AACGTTGACA ACCCGAAAAT AACAACCGGT AAGCCTTTAT TTGGGCTTGA CTTCTACCGT
GAGGGGATGT TGTTCGCCAT GCTTCAACGT CCGGCATTTG GGTATAAGCT TAAATCCCTC
AATGCTGAAG CCGCCAAAGC AATGCCGGGC ATTGTGAATG TAGTGACGTT TGATAACAAT
GTGGCTGTGG TTGGAAAATC GACCTGGCAG GTTAAGAAAG CTAAAGACGC TCTGAAAATT
GAATGGGAAA AAGCCGATGC GTTAGAAAGC ACGACAGACC ATAATCGCTT ATTCAAGGAG
TTATTAGATA GTTCTAACAC CACGGTCCGC CGGAAAGATG GTGACGTTGA TACTGCGTTC
AAAAATGCCG CCAAGGTTGT GAAGGCCGAA TATCAATGCC CGTTCTTGTC TCATGCGCCA
ATGGAGCCAA TGAACTTCTT TGCGCATGTC CGTCCAGATG GCGTTGAGCT TGTAGGGCCA
ACGCAAACCC CCGAACTGGC CCGGAATGAA ACCGCTAAAC TTCTTGGTAT CACACCCGAC
AAAGTTTCGG TTCAATTAAC GCGAATGGGT GGCGGTTTTG GGCGTCGTCT GAAGGCCGAT
TACGTGGTCG AAGCTGTGCA AGTGTCGAAG CTGGTAAATG CGCCTGTAAA GCTGATCTGG
ACCCGCGAGG ATGACATGAC TGGCGGTAGC TACCGGCCAG CCGTACGTTA CCGATTCGAA
GCAGCCCTTG ACGCACAAGG TAACATGATA GGCTATAAAC TTCGAGGAGC CAGCATAAAC
GCCGGTAATG CAACACGGGA AGATAACTTC CCCGCTGGTG CCGTCGACAA TCTGTTAATT
GATAGCGTTG ATCACAAATC CCCAATTACA ACCGGCCCCT GGCGTGCACC CATTACCAAC
TTTCTCGCCT TTGCTGAGCA ATCGTTTATT GACGAAGTTG CACAGGCAGC GGGTAAAGAC
CCAGTGCAGT TCAGACTTGA GCTGTTGAAT AAGGCAAAGC AGAAGCCAGT GGGGGCAATT
AAGTACGATA TCGATCGAAT GAAAGGCGTA ATCGACTTAG CCGTAGAAAA ATCGGGATGG
GGTAAAAAGA AGGGTGCAGA TGGTAAACCG GTGGCACAGG GATTCAGCGT TTACTTCTCG
CACCGTTCGT ATGTAGCTCA GGTAGGCGAG GTAGTGGTGC AAAAAGGTAA GCCGGTCTTG
CAAAAGGTTT ATTCAGCTGC TGACTGTGGT GTGGTTATTA ACCAGAGTGG TGCACAACAA
CAGGTACGGG GCTGCGTCGT TGATGGCATC GGTCATGCGA TGTATGGAAA TCTTACCTTC
AAAGATGGTA TGCCGCAGCA GAAAAACTTC AACGAATACC GGCTTATTCG TCTGAATGAA
ATTCCTGAAA TAGAAGTTCA CTTCGTGCAA AACGAAGTTG ACCCCACAGG TTTGGGCGAA
CCATCGCTTC CACCTGCTGG CGGTGCGGTT GCCAATGCTA TTTTTAAAGC GACGGGCAAG
CGGCTCCGGA GTCAGCCCTT TGTTGAGCAG GACGAATTTA AAGGAGTTTC CTGA
 
Protein sequence
MQTIEHSSRR GFLKIAAATG GGLILGFNWF ESEAATASAA GVPVAAGADF NSYLSINPQG 
IITILSPNPE VGQGIKTAFP IIVAEELDAD WTKVVVEQAP LDTKKFERQV AGGSGSIPHS
WERLRKAGAT ARQMLVGAAA KRWSVPGSEC TTEKGFVIHS ASNRKLSYGE LATEAAQLPV
PTDVKLKAIK DFKLIGSTVK NVDNPKITTG KPLFGLDFYR EGMLFAMLQR PAFGYKLKSL
NAEAAKAMPG IVNVVTFDNN VAVVGKSTWQ VKKAKDALKI EWEKADALES TTDHNRLFKE
LLDSSNTTVR RKDGDVDTAF KNAAKVVKAE YQCPFLSHAP MEPMNFFAHV RPDGVELVGP
TQTPELARNE TAKLLGITPD KVSVQLTRMG GGFGRRLKAD YVVEAVQVSK LVNAPVKLIW
TREDDMTGGS YRPAVRYRFE AALDAQGNMI GYKLRGASIN AGNATREDNF PAGAVDNLLI
DSVDHKSPIT TGPWRAPITN FLAFAEQSFI DEVAQAAGKD PVQFRLELLN KAKQKPVGAI
KYDIDRMKGV IDLAVEKSGW GKKKGADGKP VAQGFSVYFS HRSYVAQVGE VVVQKGKPVL
QKVYSAADCG VVINQSGAQQ QVRGCVVDGI GHAMYGNLTF KDGMPQQKNF NEYRLIRLNE
IPEIEVHFVQ NEVDPTGLGE PSLPPAGGAV ANAIFKATGK RLRSQPFVEQ DEFKGVS