Gene Slin_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1085 
Symbol 
ID8724815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1323400 
End bp1325556 
Gene Length2157 bp 
Protein Length718 aa 
Translation table11 
GC content52% 
IMG OID 
Productpeptidase S9B dipeptidylpeptidase IV domain protein 
Protein accessionYP_003385935 
Protein GI284036005 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.968267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.197428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGGTC GTCAAATGCA CTGGACCACC GATGGCAATG CCTATGCAGC CGTTGAGCAG 
GGTGATCTTG TGAAAACGGA CATCAGAACG GGTCGCAAAA CCGTTCTGCT CGGAAAGGAT
AAACTCCGCC GACCCGGCAG CGACCAGCCT ATGCCGGTGG CCGATTTTGA CTTCACGCCC
GACAGCACAT CGGTTCTAAT CTTCACAAAT ACAGCCCGCG TTTGGCGATA TAACACCAAA
GGCGATTATT ATCTGATAAA CCGGGCGAGC GGACAGGCCC GGCAGCTTGG GCAAACGGCC
GGAACGGGCG GCAAGCGCCC CGCTCAATCG CTGATGTACG CCAAATTGTC GCCGGATGGC
CGGATGGTTG GTTATGTAAG CGAGCATAAT TTGTTTGTTG AGGACGTAGC CAACGGAAAA
ATAACCCAGT TAACAACGGA TGGCACCCGC AAACGTATTA ATGGTACGTT CGACTGGGTG
TACGAAGAAG AATTTGGCTG CCGGGATGGA TTCCGATGGA GCCCCGATAG TAAACAGATT
GCCTACTGGC AGGTAGATGC TACTAAAATC AGGGATTACC TGATGCTGAA CACCACCGAT
TCTGCCTATT CGCACGTTGT TCCGGTCGAG TACCCGAAAG TGGGCGAAAG TCCTTCCCCC
ACGCGTGTTG GGATTGTTTC GGTAACGGGT GGCCAGAATG CCGTACCACC AACCACCTGG
CTCAACATCC CCGGCGATTC GCAGCAGCAT TACCTGATAC GCATGGAGTG GTTGCCTGCG
GGCGGGAGTG TTATTGTGCA GCAGTTGAAC CGCAAGCAGA ATGAAAGCAA GCTGTTTATC
TGTAAGGCGG GTGGCTCGTC TGTTACGCCA GTCTATACCG AAACGGACAA GGCCTGGATT
GACGGTAAAG CCCGCTGGAG CCGCGATGAC CCAAGCGGCT GGGAGTGGCT CGAAAATGGC
AAATCGTTTG TCTGGGTATC GGAGAAAGAT GGCTGGCGGC ATTTGTATCG AATCACAACC
GATGGCAAGA AAGAAACCCT GCTGACACCG GGTGGGTATG ATATTGCTAC CATCAGCCAC
ATCGACGAGC CGACTAACAA AATTTATTTC ATTGCGTCGC CGGAGAACAC CAACCAGCGG
TATCTGTACC GGACGAGTCT GGACGGGAAA GGCAAAGCGG AGCGGGTAAC TCCCGCCGGG
CAGTCGGGAA CGCATAATTA TATCATTTCG CCCAACGGGA AATTCAGTCA GCATACGTTT
ACCAACTACC AGACATCACC CGCCCGCGAA TGGATTAGCC TGCCCGACCA TAAAGCCGTC
AATGAGGCCG AAAGTATTGC CGCCCGCGTA AAGCCCGTTG CCAAATCGAA CATCAGTTTC
TTTACGCTAA AGACAGAAGA TGGTGTTTCG CTCGATGGCT GGATGGCCAA GCCGACGGAT
TTCGATAGTA CGAAAAAGTA CCCAATCGTA TTTTACGTCT ACGGTGAACC GGCAGGTAGC
ACGGTAAATG ATGACTTTTC TATTGGGCAG AACCGGCTTT TTCAGGGCGA TATGGCCAAG
GCGGGTTATA TTTATGTGGC CCTCGATAAC CGCGGAACAC CAAATCTGAA AGGAACTGCC
TGGCGTAAGT CGATCTACCG CCAAATCGGT CGCATCAACA TCCGCGATCA GGCGATGGGG
GCGAAGAAAC TATTTTCTCA ACATGCCTTT ATTGATACCA GCCGGGTTGC GGTCTGGGGA
TGGAGTGGGG GCGGGTCCAC GACCTTACAT CTGTTGTTTC AGTACCCGGA CATTTACAAA
ACGGGTATTT CCATTGCAGC CGTTGGTAAT CAATTGTTTT ACGACAATAT CTACCAGGAG
CGGTATATGG GTATTCCGCA GGAAAACCGG GAGGATTTTG TAGCCGGTTC ACCGATCACG
TACGCTAAAA ATCTTCGGGG TAATCTGCTT TATATCCATG GCACCGGCGA TGATAACGTG
CATTATGACA ATGCCGAAGT GCTGATTAAC GAGTTGATAA AACACAACAA GCAGTTTCAG
GTGATGCCGT ATCCAAACCG TTCGCACGGT ATTAGTGAGG GGGAAGGCAC AACCCAGCAT
CTACGCACTT TGTATACAAA CTACCTACTA AAAAACTGCC CTCCGGGAGC ACGATAA
 
Protein sequence
MPGRQMHWTT DGNAYAAVEQ GDLVKTDIRT GRKTVLLGKD KLRRPGSDQP MPVADFDFTP 
DSTSVLIFTN TARVWRYNTK GDYYLINRAS GQARQLGQTA GTGGKRPAQS LMYAKLSPDG
RMVGYVSEHN LFVEDVANGK ITQLTTDGTR KRINGTFDWV YEEEFGCRDG FRWSPDSKQI
AYWQVDATKI RDYLMLNTTD SAYSHVVPVE YPKVGESPSP TRVGIVSVTG GQNAVPPTTW
LNIPGDSQQH YLIRMEWLPA GGSVIVQQLN RKQNESKLFI CKAGGSSVTP VYTETDKAWI
DGKARWSRDD PSGWEWLENG KSFVWVSEKD GWRHLYRITT DGKKETLLTP GGYDIATISH
IDEPTNKIYF IASPENTNQR YLYRTSLDGK GKAERVTPAG QSGTHNYIIS PNGKFSQHTF
TNYQTSPARE WISLPDHKAV NEAESIAARV KPVAKSNISF FTLKTEDGVS LDGWMAKPTD
FDSTKKYPIV FYVYGEPAGS TVNDDFSIGQ NRLFQGDMAK AGYIYVALDN RGTPNLKGTA
WRKSIYRQIG RINIRDQAMG AKKLFSQHAF IDTSRVAVWG WSGGGSTTLH LLFQYPDIYK
TGISIAAVGN QLFYDNIYQE RYMGIPQENR EDFVAGSPIT YAKNLRGNLL YIHGTGDDNV
HYDNAEVLIN ELIKHNKQFQ VMPYPNRSHG ISEGEGTTQH LRTLYTNYLL KNCPPGAR