Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1085 |
Symbol | |
ID | 8724815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1323400 |
End bp | 1325556 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | peptidase S9B dipeptidylpeptidase IV domain protein |
Protein accession | YP_003385935 |
Protein GI | 284036005 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.968267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.197428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTGGTC GTCAAATGCA CTGGACCACC GATGGCAATG CCTATGCAGC CGTTGAGCAG GGTGATCTTG TGAAAACGGA CATCAGAACG GGTCGCAAAA CCGTTCTGCT CGGAAAGGAT AAACTCCGCC GACCCGGCAG CGACCAGCCT ATGCCGGTGG CCGATTTTGA CTTCACGCCC GACAGCACAT CGGTTCTAAT CTTCACAAAT ACAGCCCGCG TTTGGCGATA TAACACCAAA GGCGATTATT ATCTGATAAA CCGGGCGAGC GGACAGGCCC GGCAGCTTGG GCAAACGGCC GGAACGGGCG GCAAGCGCCC CGCTCAATCG CTGATGTACG CCAAATTGTC GCCGGATGGC CGGATGGTTG GTTATGTAAG CGAGCATAAT TTGTTTGTTG AGGACGTAGC CAACGGAAAA ATAACCCAGT TAACAACGGA TGGCACCCGC AAACGTATTA ATGGTACGTT CGACTGGGTG TACGAAGAAG AATTTGGCTG CCGGGATGGA TTCCGATGGA GCCCCGATAG TAAACAGATT GCCTACTGGC AGGTAGATGC TACTAAAATC AGGGATTACC TGATGCTGAA CACCACCGAT TCTGCCTATT CGCACGTTGT TCCGGTCGAG TACCCGAAAG TGGGCGAAAG TCCTTCCCCC ACGCGTGTTG GGATTGTTTC GGTAACGGGT GGCCAGAATG CCGTACCACC AACCACCTGG CTCAACATCC CCGGCGATTC GCAGCAGCAT TACCTGATAC GCATGGAGTG GTTGCCTGCG GGCGGGAGTG TTATTGTGCA GCAGTTGAAC CGCAAGCAGA ATGAAAGCAA GCTGTTTATC TGTAAGGCGG GTGGCTCGTC TGTTACGCCA GTCTATACCG AAACGGACAA GGCCTGGATT GACGGTAAAG CCCGCTGGAG CCGCGATGAC CCAAGCGGCT GGGAGTGGCT CGAAAATGGC AAATCGTTTG TCTGGGTATC GGAGAAAGAT GGCTGGCGGC ATTTGTATCG AATCACAACC GATGGCAAGA AAGAAACCCT GCTGACACCG GGTGGGTATG ATATTGCTAC CATCAGCCAC ATCGACGAGC CGACTAACAA AATTTATTTC ATTGCGTCGC CGGAGAACAC CAACCAGCGG TATCTGTACC GGACGAGTCT GGACGGGAAA GGCAAAGCGG AGCGGGTAAC TCCCGCCGGG CAGTCGGGAA CGCATAATTA TATCATTTCG CCCAACGGGA AATTCAGTCA GCATACGTTT ACCAACTACC AGACATCACC CGCCCGCGAA TGGATTAGCC TGCCCGACCA TAAAGCCGTC AATGAGGCCG AAAGTATTGC CGCCCGCGTA AAGCCCGTTG CCAAATCGAA CATCAGTTTC TTTACGCTAA AGACAGAAGA TGGTGTTTCG CTCGATGGCT GGATGGCCAA GCCGACGGAT TTCGATAGTA CGAAAAAGTA CCCAATCGTA TTTTACGTCT ACGGTGAACC GGCAGGTAGC ACGGTAAATG ATGACTTTTC TATTGGGCAG AACCGGCTTT TTCAGGGCGA TATGGCCAAG GCGGGTTATA TTTATGTGGC CCTCGATAAC CGCGGAACAC CAAATCTGAA AGGAACTGCC TGGCGTAAGT CGATCTACCG CCAAATCGGT CGCATCAACA TCCGCGATCA GGCGATGGGG GCGAAGAAAC TATTTTCTCA ACATGCCTTT ATTGATACCA GCCGGGTTGC GGTCTGGGGA TGGAGTGGGG GCGGGTCCAC GACCTTACAT CTGTTGTTTC AGTACCCGGA CATTTACAAA ACGGGTATTT CCATTGCAGC CGTTGGTAAT CAATTGTTTT ACGACAATAT CTACCAGGAG CGGTATATGG GTATTCCGCA GGAAAACCGG GAGGATTTTG TAGCCGGTTC ACCGATCACG TACGCTAAAA ATCTTCGGGG TAATCTGCTT TATATCCATG GCACCGGCGA TGATAACGTG CATTATGACA ATGCCGAAGT GCTGATTAAC GAGTTGATAA AACACAACAA GCAGTTTCAG GTGATGCCGT ATCCAAACCG TTCGCACGGT ATTAGTGAGG GGGAAGGCAC AACCCAGCAT CTACGCACTT TGTATACAAA CTACCTACTA AAAAACTGCC CTCCGGGAGC ACGATAA
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Protein sequence | MPGRQMHWTT DGNAYAAVEQ GDLVKTDIRT GRKTVLLGKD KLRRPGSDQP MPVADFDFTP DSTSVLIFTN TARVWRYNTK GDYYLINRAS GQARQLGQTA GTGGKRPAQS LMYAKLSPDG RMVGYVSEHN LFVEDVANGK ITQLTTDGTR KRINGTFDWV YEEEFGCRDG FRWSPDSKQI AYWQVDATKI RDYLMLNTTD SAYSHVVPVE YPKVGESPSP TRVGIVSVTG GQNAVPPTTW LNIPGDSQQH YLIRMEWLPA GGSVIVQQLN RKQNESKLFI CKAGGSSVTP VYTETDKAWI DGKARWSRDD PSGWEWLENG KSFVWVSEKD GWRHLYRITT DGKKETLLTP GGYDIATISH IDEPTNKIYF IASPENTNQR YLYRTSLDGK GKAERVTPAG QSGTHNYIIS PNGKFSQHTF TNYQTSPARE WISLPDHKAV NEAESIAARV KPVAKSNISF FTLKTEDGVS LDGWMAKPTD FDSTKKYPIV FYVYGEPAGS TVNDDFSIGQ NRLFQGDMAK AGYIYVALDN RGTPNLKGTA WRKSIYRQIG RINIRDQAMG AKKLFSQHAF IDTSRVAVWG WSGGGSTTLH LLFQYPDIYK TGISIAAVGN QLFYDNIYQE RYMGIPQENR EDFVAGSPIT YAKNLRGNLL YIHGTGDDNV HYDNAEVLIN ELIKHNKQFQ VMPYPNRSHG ISEGEGTTQH LRTLYTNYLL KNCPPGAR
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