| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1046 |
|---|
| Symbol | |
|---|
| ID | 8724776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1277599 |
|---|
| End bp | 1280799 |
|---|
| Gene Length | 3201 bp |
|---|
| Protein Length | 1066 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1549 |
|---|
| Protein accession | YP_003385896 |
|---|
| Protein GI | 284035966 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTA CGACTGGATT CATTACTGTA GGCTATCAAA GGTTTCGATT CTTATTAGTC
GTCTGTTGTA CCCTTCTGTT TCTTCAAAGT TGCGGGGTCG ACAAACCGGC GGAGATCGCT
CAACTGGACG ACAAGCTTCC AGAAACCATC GACTATAATC TGCACGTCAA GCCTATTCTG
TCTGATAAAT GTTTCTTCTG CCACGGGCCG GACAAAAACA GTCAGAAAGC CGGATTGGAA
CTTGCCACCC CAGAAGGGGC CATGGCCGCC CTCAAAAAAG CAAAAGGGAA ACACGCCATT
GTTCCCGGTG ATCTGGCAAA CAGCGAAGTT TACCACCGGA TTTTGAGCAC CGATGAGCAC
GAGATGATGC CGCCGAAAGC CTCGAACCGG TCGTTATCGG TTTACGAAAA GGCCGTTCTG
ATCAAATGGA TCGAGCAGGG AGCCGAATAT AAACCGCACT GGGCGCTCAT CAAACCGCAA
AAACCAACCT TCCCAACGGT AAAAAACACA AGCTGGCCCA AGAATCCAAT CGACTATTTT
ACGCTGAGCA AGCTGGAGGA AAAAGGACTC ACCCCTTCGC CCGAAGCCGA TAAGGAAACC
CTCCTTCGCC GGGTAACCCT CGACCTCACT GGGCTACCGC CTACCCTTGC CGAAATCGAC
GCTTTTCTGG CCGACACCTC GCCCAACGCC TACGAAAACG TAGTCAACCG GTTGTTGAAG
TCGCCCCATT ACGGCGAGAA AATGGCGGTC GACTGGCTGG ATTTATCGCG CTATGCCGAT
ACACATGGCT ACACCGTTGA CCGATACCGA CCCATGTGGC CCTGGCGCGA TTGGGTCATT
CAGGCATTTA ACCGCAACCG GCCATTCAGC CAGTTTATCA CCTGGCAACT GGCGGGCGAT
CTGCTTCCCA ACCCAACGCC CGAACAGCGG CTGGCAACGG CCTTCAACCG CAACCATTCG
CAGAATATGG AAGGCGGCAT TATCAACGAG GAGTTCCGGG TGGAGTACGT CGCCGACCGG
ACCAACACGC TGGGTACGGC CTTGATGGGT ATGACCGTCG AGTGCGCCCG CTGCCACGAC
CATAAGTTCG ACCCCATCTC GCAGAAAGAT TATTACAGCC TGTTCGCTTT TTTCAACAAC
GTGGACGAAG CCGGGCAGAT TTCCTGGGAC GATGCCATGC CCGTGCCCAC CATGCTGCTC
ACCCAGCCGA AAGAAGACAG CTTGCTGGCC TTCATCGACA CGAAAATCAG GAAGGCAGAA
ACCGATCTAA AACAAACCGT ACAAACCGAA CAGAAAGCCT TTGACGCCTG GCAGGCGAAG
ACCAATGCGG TGCCGTTCGA TGCCCGCAAA GGACTACAGG CACGTTTTAC CTTCGATAAA
CTGGTGAAGG GACGGTTCGT GAATGAAGTG AGCATCAAAG ACAGCGGTAA AGTAGCAGAC
CCCGTGCTTG TGCCCGGCAA GCTGGGTAAT GCCTTTCAAT CCAACGGCGA CGACATTCTG
ACACTCGGCC AGGCCGGTGT TTTCAATCGC TCGCAGCCGT TCTCCATTGG CGTGTGGGTC
AACATTCCGA AAGGCGTGTC GAAAGCGGCC CTTGTTCACA AAGGGAACGG TGATATTCTG
TATAATTTCC GGGGGTACTT CCTCAACCTC CGCGACGATA AAGCCGAACT GCTGATGGCC
CATACCTGGC CTTACAACAG TATTGTCCGG GTTAGTCGGC AGGTGCTGCC CAAGGAAAAG
TGGATTCAAC TGACCATGAC CTACGACGGC TCCAGCAAAG CGAACGACTT CCGGCTGTAC
GTCGACGGGC AGGAAATGGC CTTACAGACC GAACGCGACA ATCTCTACAA AGACATTTTA
TTCAACGGAA ATCAAACGGG TCTGATGGTG GGGGCAGATA TGCGCGGACC GGGTTTCAAG
AAGGGGCTGG TCGACGAACT GGTTGTCTAT AACCGTACGC TGAGTCCTCC TGAAGTGCAG
GCGCTGGCCC AGTCTGTGCA GCAGGTAACG CCGATGAAAG GCGACCCGTT GAAACAGTAT
TACTTCAGTC ATCTATCACC CGCTTACCAG CAGCAGCAGC AGGCTTTGCA GCAACTCCGG
GCTGAGCGGA ACAAACTGGT GGAGGCCATA CCGGAAATTA TGGTGATGGA GGAGATGAAA
ACGCCCCGTC CAACCTACCT GCTCAAACGG GGTGTTTACG ACGCCCACGG CCCGCAGGTA
AAACCCGATG TGCCGGCCAG CGTGCTGCCC TTTTCGCCGG ATCTTCCTCG CAATCGGCTG
GGGCTGGCCA AATGGCTGCT GCACCCCGAT AACCCGCTGA CGGCGCGGGT GGTGGTAAAC
CGGTACTGGC AAACGTATTT CGGCAACGCT ATTCAGAAGT CAGCCAACAA CTTCGGAAAT
CAGGGCGGGC TGCCTACTCA CCCGGAACTG CTCGACTGGC TGGCGGTTAC CTTCCGAGAG
AGCGGCTGGA ACATGAAAGC CATGCAGAAG CTGATTGTGA TGTCGGCCAC TTACCGGCAG
TCATCGTACG GCACCCGCGA AAGTTTGCAG AAAGACCCGG AAAACACCTG GTTGTCGCGC
GGACCGATTT CGCGCCTAAC CGCCGAGATG ATTCGCGACA ATGCGTTGGC CGCCAGCGGC
CTGTTAGTCA AACAACTGGG TGGCCCCAGT GTAAAGCCTT ATCAACCCGA AGGACTCTGG
GCGGTCAATA ACACGACGTA TGAACAGGAC AAAGGAGACA GCCTATACCG CCGGAGCCTG
TACACGTTCT GGCGTCGGAC CAACCCGCCC CCGTCCATGA ATACCTTCGA TGCGCCGTCG
CGCAGTTACT GCGTGGTTCA ACGACAGAAA ACTAGTACCC CATTACAAGC ACTGGTGTTG
CTCAACGATC CGCAATTTGT CGAAGCCGCC AAAGTCGTTG CCGAACGGTC GTTTGCCCAA
CACACCACCG TACCGGATCG GTTAACGCAC CTGTTTCGGC TTTTGGCCAG TCGGAAACCA
GCACCAAAGG AGCTGGCTAT CTTAACCCGC TTGTATCAGC AGGAATACCA GTTATTTACG
AAAAATCCGG CCAAAATGCA GGGCTGGCTG CAGGCCGGTG ACTATAAACT GAAGGATGTA
GCCGACAAGC CTGCTTTGGC CGCTGGTGCC GTTGTGGCCA GTACCGTCAT GAATTCCGAA
GCGTTCGTTA CCAAGCATTA G
|
|---|
| Protein sequence | MAITTGFITV GYQRFRFLLV VCCTLLFLQS CGVDKPAEIA QLDDKLPETI DYNLHVKPIL
SDKCFFCHGP DKNSQKAGLE LATPEGAMAA LKKAKGKHAI VPGDLANSEV YHRILSTDEH
EMMPPKASNR SLSVYEKAVL IKWIEQGAEY KPHWALIKPQ KPTFPTVKNT SWPKNPIDYF
TLSKLEEKGL TPSPEADKET LLRRVTLDLT GLPPTLAEID AFLADTSPNA YENVVNRLLK
SPHYGEKMAV DWLDLSRYAD THGYTVDRYR PMWPWRDWVI QAFNRNRPFS QFITWQLAGD
LLPNPTPEQR LATAFNRNHS QNMEGGIINE EFRVEYVADR TNTLGTALMG MTVECARCHD
HKFDPISQKD YYSLFAFFNN VDEAGQISWD DAMPVPTMLL TQPKEDSLLA FIDTKIRKAE
TDLKQTVQTE QKAFDAWQAK TNAVPFDARK GLQARFTFDK LVKGRFVNEV SIKDSGKVAD
PVLVPGKLGN AFQSNGDDIL TLGQAGVFNR SQPFSIGVWV NIPKGVSKAA LVHKGNGDIL
YNFRGYFLNL RDDKAELLMA HTWPYNSIVR VSRQVLPKEK WIQLTMTYDG SSKANDFRLY
VDGQEMALQT ERDNLYKDIL FNGNQTGLMV GADMRGPGFK KGLVDELVVY NRTLSPPEVQ
ALAQSVQQVT PMKGDPLKQY YFSHLSPAYQ QQQQALQQLR AERNKLVEAI PEIMVMEEMK
TPRPTYLLKR GVYDAHGPQV KPDVPASVLP FSPDLPRNRL GLAKWLLHPD NPLTARVVVN
RYWQTYFGNA IQKSANNFGN QGGLPTHPEL LDWLAVTFRE SGWNMKAMQK LIVMSATYRQ
SSYGTRESLQ KDPENTWLSR GPISRLTAEM IRDNALAASG LLVKQLGGPS VKPYQPEGLW
AVNNTTYEQD KGDSLYRRSL YTFWRRTNPP PSMNTFDAPS RSYCVVQRQK TSTPLQALVL
LNDPQFVEAA KVVAERSFAQ HTTVPDRLTH LFRLLASRKP APKELAILTR LYQQEYQLFT
KNPAKMQGWL QAGDYKLKDV ADKPALAAGA VVASTVMNSE AFVTKH
|
|---|
| |