Gene Slin_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1040 
Symbol 
ID8724770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1267744 
End bp1268841 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content48% 
IMG OID 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_003385890 
Protein GI284035960 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACTC AAATTTTACT CGTTGAAGAC GAAGCCCAAA TCCGAGAAAA CGTAGCTGAA 
CTGCTTACGC TACATGGCTT TCAGGTAGAA ACAGCCGTGA ATGGTCGTGA GGGTATAAGC
CAGGCTTTGT TACAGCAACC AGATTTAATT TTGTGTGATA TCATGATGCC CGAAGTTGAT
GGGTATCAAG TACTGGATGT TGTCCGTAAT AATCGGTCGA CCGCCAATAT TCCATTTATC
TTTTTGACCG CCAAAACCGA ACCTGCCGAC CTGCGCCGTG GTATGGTCAT GGGGGCTGAC
GATTACCTGA CAAAACCCTT TACATTCCAG AGTCTGCTCA GCGCCATCGA AAGCCGGTTA
CAACGGGAGG CAATGCGGAA AGCAGATTTA AAGGCGCAGA TGGAAAACTT TCGTCACTCC
CTGGCGTCGG TGTCGGTTCA TGAGTACAAC ACTTGTCTTA CGGGTATAAT TGGGTTTGCT
TCGATGTTAA CCGACCCAAG TCAGGGATTT AACGGCGAGG AGACACAGAT GATGCTCAGC
ATGATTAAGG TGAGTGGCCT GCGGCTGAAA CGCTCGCTGG ATAATATCCA GTTGATGGAC
CTGTTACAAA AAATGGAGCC ATCACATCCT GAGTACGCAT ACTATGCAAG CGGCAGCTCC
ACCATTTCAG CAGAACTTGT TACGGCCTGT GTCGAGTCAA TTGAACTCCG GCTGGATAAA
AAAGTAGACT GGCGGCAGGA AGTGGCTACT GCGCAACTTC AGCTTTCAGC TATAAATTTG
AAAAAGTGCC TCGAAGAGTT AATCGATAAC GCCTTTAAGT TCTCTTATCC CGACCAGACC
GTCCATATGT TCGGCGAACC GGATGGAGCA GGGTATCGCT TTACCATCAC CAACTCAGGC
CAGCCGTTTA CACCCGAAAA CGATGCAAGT ATTGCACCTT ACGTGCAGTT TGACCGGAAA
AAATACGAAC AGCAGGGGTT CGGTATAGGC TTGTCTATCG TGCGCGCAAT CGTGGAGTTA
AATAATGGAA GGTTATCGAT CGAGAGCCCG TCAGCGGGCT TTACCAAAGC AGTGATTTGG
CTACCCCGTG GAGATTAA
 
Protein sequence
MTTQILLVED EAQIRENVAE LLTLHGFQVE TAVNGREGIS QALLQQPDLI LCDIMMPEVD 
GYQVLDVVRN NRSTANIPFI FLTAKTEPAD LRRGMVMGAD DYLTKPFTFQ SLLSAIESRL
QREAMRKADL KAQMENFRHS LASVSVHEYN TCLTGIIGFA SMLTDPSQGF NGEETQMMLS
MIKVSGLRLK RSLDNIQLMD LLQKMEPSHP EYAYYASGSS TISAELVTAC VESIELRLDK
KVDWRQEVAT AQLQLSAINL KKCLEELIDN AFKFSYPDQT VHMFGEPDGA GYRFTITNSG
QPFTPENDAS IAPYVQFDRK KYEQQGFGIG LSIVRAIVEL NNGRLSIESP SAGFTKAVIW
LPRGD