Gene Slin_1036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1036 
Symbol 
ID8724766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1260902 
End bp1262485 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content50% 
IMG OID 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_003385886 
Protein GI284035956 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTGC TCGTAGATGA TAGGCCCGAG AATCTCCTTC CTCTGAAAAA GATTCTGGAA 
TTGCATCGTT TTTCGGTCGA TACCGCTGAA TCCGGTGAGG AGGCTTTGAA AAAAGTTCTC
AAAACGGATT ATTCAGTTAT TATTCTCGAC GTACAAATGC CCGGTATGGA TGGGTTCGAG
GTCGCGAACG CTATTGCTGG TTTTAGCCGA ACCCGCGACA CCTCCATCAT TTTCCTTTCT
GCCGTCAATA CGGATAAGAA GTTCATTACC AAGGGCTATA CCTCGGGCGG AATCGACTAT
TTGACCAAGC CAGTCGACCC CGACATTCTG GTTCTTAAAG TTAAAACGTT TCATAAACTC
TACGAGCAAC AACAGGAGCT CAGGGATGCT CAGGCTTTAC TTCGCAGAGA AGTCGATGTT
CGAAGAAAGG CTCAGGAAGA ACTGGCCGAA CGCATGCAGG AGCTACAGGT TGTGCTGGCT
TCATTGCCAC AAATGGCCTT TACGGTAGCC CCGGACGGAC GTATCGAATA CGTCAATGAA
CACTGGTATA ATTACGCCAG CGACACCACC ACATTCCCGC ACTCCCACCC CGACGATCAC
CTTTGCCACG ACTGGGAACA GGCACTTGTT AGCGGTGTTG AGTTCACCCG CGAAGTTCGG
TTAAAAGCTC TGCACGCAGA GGACTACCGA TTTCACTTAC TGCGGGTCAT TCCCATTCAT
CAGCAGGGAG CCCTGATCCG GTGGATCGGC ACCTTTACGG ACATCCACCC TCAGAAACAG
GCGGCTGAAC TATTGGAGCA ACAAGTCAGA TTACGAACCA ATGAACTGCT CACCAAGAAC
GAAGAACTCG AACGCATCAA TCAGGAACTT CAGCAGTTTA CCTGGGTAGT TTCTCACGAT
TTGAAGGAAC CTCTCCGCAA AATTCAGTTG CTTAACGACA CGGTTAAAGT CAAGTACCTG
AGTACGAACC CGGAAGCCGC AGCCTATCTC GACCGGTCCA TTCAGTCGTC GGCGCGCATG
TCTAATCTGA TCAAGGATCT GCTGGTCTAT TCGCAACTGT CGGTACACGA ACCGTTTCAG
CCCACCAATC TGAACACGCT GCTGGCCGAA CTGTTACAGG ATTTCGATGA GTTGATCTAC
CAGAAAAGGG CTACGCTTAC AATCGACGAA CTTCCTGTTA TTGATATTAT TCCGACCCGA
ATCAGACAGG TGTTTCAGAA CCTGCTGAGC AATGCCCTCA AGTTTTCGAA GCCCGATGTA
CCGCCCGCCA TTCACATCAG TGCCGAGCGG GTGGAACATA AGTCTATTGA CAGCCCCCCC
TCTCCTACGG GCGATTACTG CCGAATTGTT ATTCGTGACA ACGGAATTGG CTTCGACGAG
AAGTTCCTGA GCCGCATCTT CATTATTTTT CAGCGGCTGC ATACCCGCAC CAATTACGAA
GGCACGGGGA TTGGCCTGGC CATTGCCAAG AAAAACATGG ATAAGCACAA CGGGCTCATA
TCGGCCCAAA GCCGCGAGAA CGAAGGTGCC AGCTTTATTC TCGTTTTGCC CATCCGGCAG
ACGGGCGCTT TACTGCCTAA CTAA
 
Protein sequence
MILLVDDRPE NLLPLKKILE LHRFSVDTAE SGEEALKKVL KTDYSVIILD VQMPGMDGFE 
VANAIAGFSR TRDTSIIFLS AVNTDKKFIT KGYTSGGIDY LTKPVDPDIL VLKVKTFHKL
YEQQQELRDA QALLRREVDV RRKAQEELAE RMQELQVVLA SLPQMAFTVA PDGRIEYVNE
HWYNYASDTT TFPHSHPDDH LCHDWEQALV SGVEFTREVR LKALHAEDYR FHLLRVIPIH
QQGALIRWIG TFTDIHPQKQ AAELLEQQVR LRTNELLTKN EELERINQEL QQFTWVVSHD
LKEPLRKIQL LNDTVKVKYL STNPEAAAYL DRSIQSSARM SNLIKDLLVY SQLSVHEPFQ
PTNLNTLLAE LLQDFDELIY QKRATLTIDE LPVIDIIPTR IRQVFQNLLS NALKFSKPDV
PPAIHISAER VEHKSIDSPP SPTGDYCRIV IRDNGIGFDE KFLSRIFIIF QRLHTRTNYE
GTGIGLAIAK KNMDKHNGLI SAQSRENEGA SFILVLPIRQ TGALLPN