| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1035 |
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| Symbol | |
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| ID | 8724765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 1257267 |
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| End bp | 1260872 |
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| Gene Length | 3606 bp |
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| Protein Length | 1201 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_003385885 |
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| Protein GI | 284035955 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAAA CATCTACCTC AAACTCCGTT ATTCGACAGT TACAACTTGT CTTTACGCTC
TCAACGCTGC TGCTGCTAAT TAGTCTGACG GCCTCATACT ACAGCATTCA GAAGTTAATC
AGCAACTCCA AACTGGTAAA TCATACAAAT CAAGTATTAA TTGAAGCTGA AAACATTATT
TCGTACATGA AAGATGCGGA AACGGGGCAG CGCGGCTACC TCGTTACGCT CGATCCGCTC
TTTCTGGAAC CCTACAACGG TAGCCGTTCA AAAGTAGCGG CCAGCTACGA CCAGCTCTAT
GAGTTAACCA CCGATAACCC AACCCAGCAG CGGAGCCTTA GCCGCGTTAA ATCGCTGTAC
GAAGCCAAAT TCGCGCAGAT GCAGCGTGTT ATTGATATAA CGAAACGGAA CAATCTCTTT
AACCGGGACA CACTCCGGCA ACACCAGGAA ATGACTCGCG GAAAACGGAT CATGGACGAT
CTGCGAGTGG TTATCAACCG GTTAAAATTA GACGAGAACC GACTGCTCAA CACCCGTATT
CAACAGCAGC AGGTGTATAT AAATTACACC CCTTTTTTAC TATTGTTTGC CGCTGCCGTT
TCCATGCTGA TTACGGCACT TACCTACGTG CGAATAAAGC AGGATCTGGA TAACCGAATT
GAGAAGCAGA AACTGGACGA AGCAAAGTAT ATCGAAACGG CCGGGCGTAT TTCGGTAATG
GAGGACATAA CCGGTAAAAT TGCCGGGGGC GATTATTCCG CACGCAGTCA GGACACGCAG
GATGACGAAC TGGGCCGCAT TGGCAAGGCG CTGAATCAAA TGGCGGGCGC TCTGGAACAG
ACATTTACGG ACTTAAAAAA ACGAAACTGG CTGCAGACAG GTACCGTAAA AATTGGGGAT
GCTATTCGGG GGGAGAAAGA GTTGAAAAAG CTGGGCAATC GCCTGATCGA CGCCATTGCC
GATTACCTGA ACGCTCCGCA AGCTACTATT TACCTCCTTG ACAGCGATTT TTCGTTTAAA
CTGGCAGGCA GCTATGCGGC CCAGCGCCCG CCCCTGAGCA TCAGGGCTGG TGAGGGATTG
GCCGGAGAGG CTATCGAACG CAAGAAACTC ATTGTCATTC AGGATGTTCC GCCTACCTAT
AGTCGCATTG CCTCTTCGCT GGGCGATGCC GTCCCTACAG CCCTGGTTAT CGCTCCGCTG
GTGTATGCCG ATGTTTGCAT TGGCGTTATA GAAGTGGGGT TACTGCACAG TCCTGATTCG
CTGGAAGTTG CCTTTCTGGA GCATAACCTG GAAGCGATGG CTATTGGCGT TAATTCCGCC
CTGGATTACA TCAGGCTCCA GAACTTCCTG GAAGAAACCC AGGCACAGGC TGAGGAGCTA
CAGGCCCAGC ATACGGAAAT GGAGAACCTG AATGCCGAGC TGGAAATGCA GGCCCAGAAA
CTACAGGCAT CGGAAGAAGA ACTGAGGGTG CAGCAGGAAG AGTTGCAGCA AACCAATACC
GAACTCGAAG AACGGGGCTT ATTGCTGGAG GAGAAAAACG ACGAAATTCA GAAAAAAGCT
GATGAACTGG AACTGACTAC CCGGTATAAA TCCGAGTTTT TGGCCAACAT GTCGCACGAG
TTAAGAACAC CGCTCAACTC CATTCTGCTG CTGAGCCGGT TACTGGCCGA GAACAACGAG
GCTACGCTTA CCCCCGATCA GGTCGAGTAT GCGCGTGTCA TTCAATCGTC GGGCAACGGA
CTACTGGGGC TGATCGACGA AATTCTGGAT TTGTCGAAGA TTGAAGCTGG ACAGATGAAG
CTGGATTACC AGGACATGTC CATCGCCGAA ATTACCGATG AACTACAGTC TCTGTTCGGT
CTCGTTGCTA AAGAAAAAGG ACTGGATTTC GCCATAACCG TAAAACCAGA TGTACCGACG
GTTATTGAAA CCGACCGGAT GCGTCTGGGG CAAATCCTCA AAAACCTACT CTCCAACGCC
ATCAAGTTTA CGTCGAGCGG TCAAGTGTCG CTGCGTATTG AGCGCAGCAC TTCAGCCGCT
TCTACACTCT GCTTTGTGGT CAAGGATACG GGAATTGGCA TCCCGCCCGA AAAACAACCC
CTCGTCTTTG AAGCCTTTCA GCAAGCCGAC GGGTCTACCA AACGAAAATA CGGCGGCACC
GGCCTCGGGC TTTCTATCAG CCGTGAACTG GCCAAGCTGC TGGGGGGCGA AATCACCCTG
TCCAGCGAGG TGAACGTCGG CAGCGAATTC ACCATTCTCC TGCCTCTTTC CAAAGACATG
CCCGAGGCCG TATCGCCGGA AATCCCGAAG CCAGAACCGC AGCTTACGCC CACGGCTGAC
ACAAAACCCA GGCAGTTGAC GGAGTACATC AGTTTAACCA TTCCGGAGCC GATCCCGGAC
GATCGGCACA CGGTTGCGGA GGGTGATAAA ACGATTCTGA TCGTGGAAGA CGACCCTAAC
TTTGCGAAAT CACTGCTCGA TTACGCCCGC AAAAAAGGGT ATAAAGGCAT TGTTGCCGTT
CAGGGCGACG AAGGTTTAAA ACTGGCATCG GTGTATAATC CGCTGGGTAT TCTGCTCGAT
ATTCAGTTGC CCGTCATGAG TGGCTGGGAG GTTATGGATG CCTTGAAAGC CAACCCGAAA
ACCCGGCCAA TTCCGGTGCA TATCATGTCG TCGCACAAGC TAAAGAACGA AAGCCTGCTG
AAGGGTGCCA TTGATTTTGT GGATAAGCCG GTTGCCTTCG AGCAATTGCA GGAAGTCTTT
AAAAAGATTG AGTACGTCCT CAACCGCAAC CCTAAAAAAG TGCTGATCGT TGAAGACAAT
CCCAAACACG CCAAGGCGCT GGCTTATTTT CTGGAGACGT TCAACATCAC TTCCGAGCTA
AAAAGCAACA TTACCGAGGG AATCGATGCC CTGAAGCGTA AAGAAGTGGA CTGCGTTATT
CTGGACATGG GCGTGCCCGA CTCCAAAGCG TACGAAACGC TGGAGGTTGC TAAGAAAGAC
CCAGGCCTGG AAAACCTGCC GATTATCATT TTCACGGGCA AGAGCCTGTC GATGTCGGAA
GAGCTGAAGA TCAAAAAATA CGCTGATTCC ATCATTGTCA AAACCGCCCA CTCCTACCAG
CGTATGCTCG ATGAAGTGTC GCTCTTCCTG CATCTGGTCG AGGAAAACAA GCAGAACACA
GCCCCCAACG GGACTGCCAG GAAGCTGGGG GCCCTGAGTC AGGTTCTCAG GAACAAAACC
GTGCTGGTGG CGGACGATGA TGTACGGAAT ATTTTCTCCC TGTCGAAAGC ACTAGAGCAG
TTCAACATGA CTGTAATAGC CGCCCTGGAT GGCAAGGAAG CCCTTCAGAA ACTGGACGAA
AACCCCGGCA TCGACGTTGT GCTGCTGGAT ATGATGATGC CCCAGATGGA TGGCTACGAA
ACAGCCCGAA AAATAAGGGA GCATTACCAG TGGAAAAACT TACCCGTCAT TGCCGTAACG
GCCAAAGCCA TGACCGGCGA CCGGGAAAAA TGCATTCAGG CGGGGGCGTC GGATTACATC
ACCAAGCCCG TTGACATTGA CCAGTTGATC TCGCTGCTGC GGGTTTGGCT GTACGAACGA
AGTTAG
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| Protein sequence | MPQTSTSNSV IRQLQLVFTL STLLLLISLT ASYYSIQKLI SNSKLVNHTN QVLIEAENII
SYMKDAETGQ RGYLVTLDPL FLEPYNGSRS KVAASYDQLY ELTTDNPTQQ RSLSRVKSLY
EAKFAQMQRV IDITKRNNLF NRDTLRQHQE MTRGKRIMDD LRVVINRLKL DENRLLNTRI
QQQQVYINYT PFLLLFAAAV SMLITALTYV RIKQDLDNRI EKQKLDEAKY IETAGRISVM
EDITGKIAGG DYSARSQDTQ DDELGRIGKA LNQMAGALEQ TFTDLKKRNW LQTGTVKIGD
AIRGEKELKK LGNRLIDAIA DYLNAPQATI YLLDSDFSFK LAGSYAAQRP PLSIRAGEGL
AGEAIERKKL IVIQDVPPTY SRIASSLGDA VPTALVIAPL VYADVCIGVI EVGLLHSPDS
LEVAFLEHNL EAMAIGVNSA LDYIRLQNFL EETQAQAEEL QAQHTEMENL NAELEMQAQK
LQASEEELRV QQEELQQTNT ELEERGLLLE EKNDEIQKKA DELELTTRYK SEFLANMSHE
LRTPLNSILL LSRLLAENNE ATLTPDQVEY ARVIQSSGNG LLGLIDEILD LSKIEAGQMK
LDYQDMSIAE ITDELQSLFG LVAKEKGLDF AITVKPDVPT VIETDRMRLG QILKNLLSNA
IKFTSSGQVS LRIERSTSAA STLCFVVKDT GIGIPPEKQP LVFEAFQQAD GSTKRKYGGT
GLGLSISREL AKLLGGEITL SSEVNVGSEF TILLPLSKDM PEAVSPEIPK PEPQLTPTAD
TKPRQLTEYI SLTIPEPIPD DRHTVAEGDK TILIVEDDPN FAKSLLDYAR KKGYKGIVAV
QGDEGLKLAS VYNPLGILLD IQLPVMSGWE VMDALKANPK TRPIPVHIMS SHKLKNESLL
KGAIDFVDKP VAFEQLQEVF KKIEYVLNRN PKKVLIVEDN PKHAKALAYF LETFNITSEL
KSNITEGIDA LKRKEVDCVI LDMGVPDSKA YETLEVAKKD PGLENLPIII FTGKSLSMSE
ELKIKKYADS IIVKTAHSYQ RMLDEVSLFL HLVEENKQNT APNGTARKLG ALSQVLRNKT
VLVADDDVRN IFSLSKALEQ FNMTVIAALD GKEALQKLDE NPGIDVVLLD MMMPQMDGYE
TARKIREHYQ WKNLPVIAVT AKAMTGDREK CIQAGASDYI TKPVDIDQLI SLLRVWLYER
S
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