Gene Slin_0974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0974 
Symbol 
ID8724704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1187897 
End bp1188469 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content44% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003385824 
Protein GI284035894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.082273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0344411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG AAGAAATCCT CGTTAAATAC CGCGACCCGT CGAGCCGGAA CTACGCCTTT 
AATCTGCTGG TACGCAAGTA TCAGCAGAAA ATCTATTGGC ATATCCGCAA AATGGTCATT
GACCACGACG ATGCTGATGA TTTAGTGCAG GAAACCTTCA TAAAAGTCTG GAATAGCCTG
GAACAGTTTC GGGGTGATAG TCAGTTATAT ACTTGGGTAT ACCGTATTGC GACCAACGAA
TGCCTTAACT TCCTGAATAA AAAACGCCGA CGGTTTTTCC TACCTATCGG CGATGTAGAA
GGCGAGTTGA TGGAAAAGCT GGAAAGCAAC GCTGCCTATG TTACGTCGGG TAGTGAGCCA
AGTGGAGAAG AAGTACAGAT GAAACTCCAG AAGGCACTTC TTAAACTTCC TGATAAGCAG
CGACTAGTGT TCAACATGAA GTACTTCGAT GATATGAAGT ATGAAGAGAT TTCGGAGATT
ACTGGTACAT CAGTAGGAGC GCTGAAAGCT TCATACCACC TGGCAGTCAA AAAAATCGAG
GATTTTATCA CGAAAACTGA TACAACTGAT TAA
 
Protein sequence
MTDEEILVKY RDPSSRNYAF NLLVRKYQQK IYWHIRKMVI DHDDADDLVQ ETFIKVWNSL 
EQFRGDSQLY TWVYRIATNE CLNFLNKKRR RFFLPIGDVE GELMEKLESN AAYVTSGSEP
SGEEVQMKLQ KALLKLPDKQ RLVFNMKYFD DMKYEEISEI TGTSVGALKA SYHLAVKKIE
DFITKTDTTD