Gene Slin_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0953 
Symbol 
ID8724683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1152301 
End bp1153356 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385803 
Protein GI284035873 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.516914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTA CTAACGGATT ATTCTGGGGC ATATTTCTGC TCACGCTGGG TGTTCTTTTC 
CTGGCCCGAC GGGCAGGCTG GCTCGATGTT GACTGGCACT CACTAGTGAA TCTGTGGCCC
GTTCTGCTGA TTCTGGCCGG TGTCAATCTC ATATTGGAAC GACGTGGTAA CCCGGCCGCT
TTCATTACCA CCGTTATGCT AGCCGTGGCT GTACCAACAA CGCTGTTTGG CTTTTTCTCC
CATGACCGGG ACCGCGATGG CTTCCATATG CGTTGGAACC ATGATAATGA TGATGAAGAC
CGTAGTTATT CGGATGACGA TGACGACGAT TCGGATGATG ACAACGGGAA TGACGATAGC
GACAACGAAG AGGACTATCG GGCAGAACGC GACCGCCGGG ATGCAGATCG TACAGAAACT
CATTCCAACA CGTTTGCCGA GCCTATGAGT GCTGATACTC GTGAGGCTGT GCTGAAACTG
TCGGGTGGCG CGGGCCGGTT TATCATCAGC GACCCAACTA CCGAACTGAT TAAGGCTGAT
ACAAAACAGA CGGTTGGGAG CTACTCCATG TCCGTAGATC GCGATGAGAC GACGCATATT
CCAACCATTG AGTTGAAACC AACGGAAGAG AAGCAACATA TCGACCTGAA AGATGGTAAT
TACGAGAACC GGGTCGATGT ACACTTGAAT ACAGCACCCG TCTGGAGTAT GGATGTTGCG
CTGGGGGCAG GTCAGGGCGA TCTTGATTTA AGCGCTTATG CGGTTAAAAG TTTGAAACTA
GGTGTAGGAG CCGCTGAACT GGATCTCAAA CTAGGCTCTA AAGCCGATCA GTCTGACGTA
AAACTGGACG TAGGAGCCGC TTCTGTCACT GTCCGGGTTC CCAAAGAAGT GGGGTGTCGT
ATTAAAAAAG ATGGTGCTCT GAACATTGAG CAACTGGACG ATTTTACCAG TGTAGGCGGA
GGAGAGTTCG TTAGTCCCGG CTATGATGCG GCCAAGAAGA AAATGCTTAT CCACTTCGAC
GGGGGAATAT CGAAGTTCAA GGTTGTGCGC TATTAA
 
Protein sequence
MKRTNGLFWG IFLLTLGVLF LARRAGWLDV DWHSLVNLWP VLLILAGVNL ILERRGNPAA 
FITTVMLAVA VPTTLFGFFS HDRDRDGFHM RWNHDNDDED RSYSDDDDDD SDDDNGNDDS
DNEEDYRAER DRRDADRTET HSNTFAEPMS ADTREAVLKL SGGAGRFIIS DPTTELIKAD
TKQTVGSYSM SVDRDETTHI PTIELKPTEE KQHIDLKDGN YENRVDVHLN TAPVWSMDVA
LGAGQGDLDL SAYAVKSLKL GVGAAELDLK LGSKADQSDV KLDVGAASVT VRVPKEVGCR
IKKDGALNIE QLDDFTSVGG GEFVSPGYDA AKKKMLIHFD GGISKFKVVR Y