| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0867 |
|---|
| Symbol | |
|---|
| ID | 8724597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1042240 |
|---|
| End bp | 1043358 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | anti-FecI sigma factor, FecR |
|---|
| Protein accession | YP_003385721 |
|---|
| Protein GI | 284035791 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGGT ATCAGCACTA CACCGTTGAA GAGTTTCTGA CCGATAGCTG GTTTCTGGCC
TGGGCAAAAC ACCAACACCC TGAAGCGCGT CAGTTCTGGG AGGAATGGCA ACTACAGAAT
CCTGCCCAAC GGCATACGCT GCTGCTGGCC AAAGACATGG CCGAAGCCCT TAAACATCGC
CCCCATGCAT TAACCGTCGA GCAGGAGCTT CTCGAAGTTG AGCGGATTGT AAAACTCGCC
CGCCCCGGAT CAATACCGTC TCGCGGGGTT AGGCATAAAG CATCGTGGAA CCGATACGGT
TGGTTAGCTG CTCTTGGATT CATGATGCTG GGCGCTGGAT GGTGGATTAG TCACCGTCAG
TCATCGGTAA CGCAACTAGC CAATATGGAT CCTGATTTCG GTCGGGAGCA CCGCTTAACG
AATCAGTGGT TTAATCAGGT AAATGGCACG TCTCAACCGA TAACACTATC GCTGCCCGAT
GGCAGTCAGC TAACGCTGAT GGCGCATAGT CAGGCCTCGT ACCCCCGCTC CTTCGATGCG
GACAAACGTG AGGTTTATCT AAAAGGAGAT GCGTTCTTTT CGGTTGTTCA CGAAGGGAAA
CGACCTTTTC TGGTCTACAG TGGTACATTA GTCACCCGCG TACTCGGTAC CCGGTTCCGG
GTTCAGGCCC GTCCGGGGGA AGCCCACTTG CGGGTGTCAG TCCTATCCGG GAAAGTGTCG
GTTATGGACC ATAAGGCCTG GATGGCAGCC CGATCGTTGG GCAGTAAGTA TGTATCGGGC
GTGGTACTGA CGGCCAATCA GCAGGTAACC TACGATCCAG GACAGCATAG CTACCAAAAA
GAGTTGGTTC CTGAGCCAAT CGTTATTTCG ACAGTAGCAG AAAGTCCGGA AACGTTCAAT
TTCGATGATG CACCAGCTAC GAACGTTTTT GAGCGTTTAA AAAAAGCTTA TGGCGTAGAA
ATCATCTATG ATGCCTCGGT TCTGCAGTCC TGTACGCTGA CAGCTTCGCT GGCGGGTATT
CCGCTTCATA ACCAGCTTCA GTTGTTGTGT GCGTCAATCG GAGCTTCGTA CGAAGTGGTC
GATACGCGTA TCATTATCAC GAGTAAAGGC TGCCCGTAA
|
|---|
| Protein sequence | MKRYQHYTVE EFLTDSWFLA WAKHQHPEAR QFWEEWQLQN PAQRHTLLLA KDMAEALKHR
PHALTVEQEL LEVERIVKLA RPGSIPSRGV RHKASWNRYG WLAALGFMML GAGWWISHRQ
SSVTQLANMD PDFGREHRLT NQWFNQVNGT SQPITLSLPD GSQLTLMAHS QASYPRSFDA
DKREVYLKGD AFFSVVHEGK RPFLVYSGTL VTRVLGTRFR VQARPGEAHL RVSVLSGKVS
VMDHKAWMAA RSLGSKYVSG VVLTANQQVT YDPGQHSYQK ELVPEPIVIS TVAESPETFN
FDDAPATNVF ERLKKAYGVE IIYDASVLQS CTLTASLAGI PLHNQLQLLC ASIGASYEVV
DTRIIITSKG CP
|
|---|
| |