Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0849 |
Symbol | |
ID | 8724579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 1026441 |
End bp | 1027184 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | IstB domain protein ATP-binding protein |
Protein accession | YP_003385705 |
Protein GI | 284035775 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.343949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAACC AAGCGACACT TGACCGACTA CGGGACCTTA AACTGGTGGG CATGTATCAG GCCTTCGAGA CCCTGCTTCG CCTACCCCTT CACCAGCAAC CGCCTGCCGA CGAACTGCTG GCCCAGCTTA CTGAAGCTGA ACATGAGTAC CGTCAACACC GACGCACCCA GATGGCCATC CGGGCGGCCC GCTTTCGCTA TCAGGCCTCG CTGGAAGAGT TGCACTACGG CCCTGGCCGC AACCTGGATA AGACGCTGGT GCTTCGTTTG GCCGACTGCC GCTTCATCGA TCGAGCCGAG AATATCTTCC TGACGGGATC AACTGGCTGC GGCAAAAGTT ACGTGGCTTC GGCCCTGGGC TATCAGGCCT GTCAGCTGGG GTATCGGGTG GGTTATCACA ATCTGATCCG GCTCATACAG CGACTGCAAC TGGCTAAAGC CGACGGCTCC TACCAGCGGG AGATGAGTCG TCTGGAGCGG CAACACCTGC TCATTCTGGA TGACTGGGGC TTACAACCCC TTGATCAGAA TGGCCGATTG GCCCTGTTAC AGATCATGGA GGACCGGCAT GGCAAGGCCG CTACGATCAT CACCTCGCAA CTGCCGGTGA GTAAATGGCA CGAATACATC GACGATCCTA CCTTGGCCGA TGCCATCCTG GACCGGCTAA CTCACAAGGC TCATCGGATG GAGTTGAAGG GTGAATCGAT GCGACGCAAG CAAAGTCTTG CGGCTGAGAA ATAA
|
Protein sequence | MNNQATLDRL RDLKLVGMYQ AFETLLRLPL HQQPPADELL AQLTEAEHEY RQHRRTQMAI RAARFRYQAS LEELHYGPGR NLDKTLVLRL ADCRFIDRAE NIFLTGSTGC GKSYVASALG YQACQLGYRV GYHNLIRLIQ RLQLAKADGS YQREMSRLER QHLLILDDWG LQPLDQNGRL ALLQIMEDRH GKAATIITSQ LPVSKWHEYI DDPTLADAIL DRLTHKAHRM ELKGESMRRK QSLAAEK
|
| |