Gene Slin_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0828 
Symbol 
ID8724559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1006058 
End bp1006387 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content48% 
IMG OID 
Productsmall multidrug resistance protein 
Protein accessionYP_003385689 
Protein GI284035759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.251219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.653712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACC TGCTTTTGTT AATCGCGATC ATTTTTGAAG TCATCGGGAC GGCGTCTTTG 
AATGCATCCC AACAGTTCAC CAAACTAACG CCTAGCTTGC TGTGCCTTGT GGCCTATATT
GGTGCTTTCT ATTTTATGAG TTTAACGTTA CGCAGTATGC CCGTTGGCAC AGCCTATGCG
CTTTGGTCGG GTGTTGGTAT CGTGCTGACT GCTATCATTG GCCTATTTCT CTTCAAGCAA
GTGCCGGATA CGGCCGCCCT GGTGGGGATG ACCCTGATTG TAGCAGGCGT ATTAGTGATG
AACCTGCTAT CAAAAACCAC AGGGCATTGA
 
Protein sequence
MKYLLLLIAI IFEVIGTASL NASQQFTKLT PSLLCLVAYI GAFYFMSLTL RSMPVGTAYA 
LWSGVGIVLT AIIGLFLFKQ VPDTAALVGM TLIVAGVLVM NLLSKTTGH