Gene Slin_0784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0784 
Symbol 
ID8724514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp950527 
End bp951927 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385646 
Protein GI284035716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATCC TGAAAACAAT ACAGTTGCTT GGCCTGATGG CGGTACTTGC CATCGACCCA 
ATCGCCCCCC CAAAAGCTAC GGCTCAGCCG GGGATAAGTG TTCCGATACA AACTTTTTAT
AACGAACTGG CTCCGTACGG ACAGTGGGTG CCCAATCCGG TATATGGCTC CGTCTGGCTC
CCTGATGTAG GCCCGGATTT TCAGCCTTAT GCAACCGACG GCCACTGGGT CGTAACGGAG
TTCGGTAATA CCTGGGTATC CGATTATGCC TGGGGATGGG CACCGTTTCA CTACGGACGG
TGGTTTTTCG ACAGCCAGTA CGGTTGGGCG TGGGTGCCGG GCAACGACTG GGGGCCAGCC
TGGGTATCGT GGCGCACGGG TGGCGGTTAT TATGGCTGGG CACCGTTAGG CCCTGGTATC
GATATTAACG TAAACGTCAA TATTCCGGCC CCGTACTGGA CGTTTGTGCC CCAGATTTAT
ATTACCAGTC CAAGGCTTTA CAGCTACCGG GTGGCGCGGC CAAACGTTAT AAATATCTAT
CAGAACACAA CCATTATCAA TAATGTGTAC CGGTCAAACA ACCGGGCCTA TGTGTACGGT
CCTAACCGGT ATGAAATTGA GCGCGTAACC CGCCAGCGTG TTCCGGTCTA CCGGATCGAT
CCGTTGGACC GGCCGGGCCG GTCTGTAGTA GGCAACGGCT CCGTAGGCTT TTATCGCCCC
GGTCAATCAT CGGGTTACGG ACAGAATTAC GGGCGTTATG ATCGGAATGA TCGTGACCGA
TATAACGATC GTTACGACAA CCGGCGTCCG GATAATAGCA ATTACAACAC CCCCGGCCGT
GACCCGTACA ATGGCGGCAA CGTTCCTAAT CGGGAATACA ACGGCAACAA CTCGCCTGGT
CGTCCTTATG AAGGAAACGC AACTACGCCG GGTCGGGAGT ATAACGGCAC CCCTAACCGG
GGTGGAACTT ACAACGGCGA CTTTAACAAC AACCCATCGT CGCCAAACCG CAGCAGGTAT
AATAGCACAC CGACACAGGG AAATAATAAC CCGCCTGCGC CCACACCTGC CCCCGCTGAA
CCTAGTCGCG GGTCATACTC ACCGGGTAAC GCCCAGTCCC AGCAGCCGGG AGGAGGTTTT
CCCCGAAGAG ATGATCAGCC TGCCGGTTAT CAGCAGCCGT CACCTGGCTA TCAGCAGGCG
CCACCTGGCC GGGCTTACGA ACAGCGAATG GAGCGCCCTG CTCAGAGCCC TGCCAATGTG
CCTTCTGCAC CAGGGGCACG TGAAAACGGT GGTGGTTTCC AGCGCCCACA GGAGAACAGG
GGAGGGCAAC CTCTACAGCG CATTCAGGAG CAAACACAGC GCGTGAATGG TGGAGGTGAA
CGCCAGCGCG GTCCCCGATA A
 
Protein sequence
MTILKTIQLL GLMAVLAIDP IAPPKATAQP GISVPIQTFY NELAPYGQWV PNPVYGSVWL 
PDVGPDFQPY ATDGHWVVTE FGNTWVSDYA WGWAPFHYGR WFFDSQYGWA WVPGNDWGPA
WVSWRTGGGY YGWAPLGPGI DINVNVNIPA PYWTFVPQIY ITSPRLYSYR VARPNVINIY
QNTTIINNVY RSNNRAYVYG PNRYEIERVT RQRVPVYRID PLDRPGRSVV GNGSVGFYRP
GQSSGYGQNY GRYDRNDRDR YNDRYDNRRP DNSNYNTPGR DPYNGGNVPN REYNGNNSPG
RPYEGNATTP GREYNGTPNR GGTYNGDFNN NPSSPNRSRY NSTPTQGNNN PPAPTPAPAE
PSRGSYSPGN AQSQQPGGGF PRRDDQPAGY QQPSPGYQQA PPGRAYEQRM ERPAQSPANV
PSAPGARENG GGFQRPQENR GGQPLQRIQE QTQRVNGGGE RQRGPR