Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0759 |
Symbol | |
ID | 8724489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 923281 |
End bp | 925407 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | glycogen debranching enzyme GlgX |
Protein accession | YP_003385621 |
Protein GI | 284035691 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAC ATTCCAAATC GAATTTCTCT TTCGAATCCA TACATTCCAA ACCGGGTAAG CCCTACCCTT TAGGTGCCAC CTATGACGGA GAAGGTGTAA ACTTCACTCT GTTCAGCGAA AACGCGACCG CTGTTCATTT ATGTCTTTAC GATCCGGCCG ATCCTAGCCA CGAAGTCGCA CGGATTCCGC TGGAAGAGCG TACAGAACTG GTCTGGCACA TATATCTCGA TGGTTTACAG CCCGGTCAGC TTTATGGCTA CCGTGTTGAC GGCCCTTATG AACCACAGTC AGGCCACTTC TTCAATCCAA ATAAGCTGCT TCTCGATCCG TATGCCAAAG CCATAAATAC CCCTGTAAAC CATAACGATG CCTGGCTGGG CTACGACTAT AAAAAGATGG CTTCTGAGCG GGAAGCCAAC GAGCCTTTGT CCATGAGTAC CGAAGACAGC GGCCCCACAA TGCCGAAAAG CGTTGTGATA GATTCGGCGT TTGATTGGGA AGATGATACC GCGCCCGACA CACCCCTGCA CCGTTCGGTC ATTTATGAGA TGCACGTTAA AGGATTTTCG TATCTGCATC CAACCATCGA CGAAACTACC AAGGGGACAT ATGCTGGCCT GGGCCAGCCC GAAAGTATCG ACTATTTACA GAAACTGGGC ATCACCGCCG TTGAGTTACT GCCTGTACAT CAGTTTACGG ACGAGAGCTA TTGGGGTTAC AACAGCATCG GCTTTTTTGC TCCCCAGAAT ACCTACTCAT CGTCCGGAAT GGCGGGGCAG CAGGTTAATG AGTTTAAGCA GATGGTTAAG AACCTGCACA AAGCAGGAAT AGAGGTTATT CTTGATGTAG TTTATAACCA TACTGCTGAA GGTAACCAGT TAGGGCCACT GCTTTCGTTT AAAGGAATTG ATAACCGTGT GTATTACCAT CAGGTTGGCG ACAATCCGGC TTATTACATG GATTATACGG GTACGGGCAA CACCTTCAAC CTGAGCCATC CTCGTGTGCT GCAACTGGTT ATGGATAGCC TGCGTTACTG GGTTACCGAT ATGCACGTCG ATGGCTTCCG CTTTGATCTG GCTTCTGCTT TGATTCGCAC CGACGAGGAG TTTGGTACGG TTTCGTCTTT CCTCGACACG GTGGCCCAGG ACCCGATTCT GGCCTCCGTC AAGCTTATTG CCGAGCCCTG GGATATTCAG TCTTATCACG TTGGCGGTTT CCCGGTCAGC TGGTCGGAGT GGAATGGCAA GTACCGGGAT ACCCTCCGGG GCTTCTGGAA GGGAGATGAG GGCAAAGCTG CCGAAACGGC CGTTCGCTTA CTGGGCAGTC CTGATTTATA CGCCAATGAC GGTCGCTCTC CGGCAAATAG TATCAACCTC ATCACGGCCC ATGACGGCTT TACCCTGAAC GATCTTGTTA GTTATAATGA AAAGCATAAC GAAGCCAACG GAGAAGACAA TAATGATGGT TCGAACGACA ACCTAAGCTG GAACTGTGGT GTCGAAGGCC CTACGGATGA CCCGGCCATT AATGAACTGC GCGAGCGTCA GAAACGCAAT TTTCTGGCAA CCATGCTGCT CAGCCAGGGT ACGCCAATGC TGGTAATGGG CGACGAATGC GGCCGTACAC AGCACGGCAA TAATAACGGA TACAATCAGG ACAGTGAAAT CAGCTGGATG GACTGGCATT GGAACGAAGC TCAACAGGCC TTGTTTGAAT TCACAAGCCA GTTAACCGCT TTGCGCCAAG AGATCCCGTT GCTGAGCCGA CGCCGGTTTT TCGACAGCGA ACAGATAGCT TATTTACTAC CCGATGGCGG AGAGATGTCC AATGATGATC TGCATAACCC ACACACGCAC TGTCTGGCAC TTTTCATTGA CGGGATGCGC GTAACGGAGC AGACCGAAGA TGGTCAGGAT ATCGGAGATG AACAGTTGAT CTGGATTTTA AACGCTTATT GGGAAACCGT ACCGTTCATG ATTCCCAAGA TTGGCCGAAA AAGCAAAGAT TGGGAGGTTA TTATGGATAC CAACTCAGGT AAGGTATTTC CGAAAGAGAT GACCGTTAAA GGTGGTCATT CAATAGATGT AGCCGGTCGT TCGTCGATGT TGTTACGACT CAAATAA
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Protein sequence | MSKHSKSNFS FESIHSKPGK PYPLGATYDG EGVNFTLFSE NATAVHLCLY DPADPSHEVA RIPLEERTEL VWHIYLDGLQ PGQLYGYRVD GPYEPQSGHF FNPNKLLLDP YAKAINTPVN HNDAWLGYDY KKMASEREAN EPLSMSTEDS GPTMPKSVVI DSAFDWEDDT APDTPLHRSV IYEMHVKGFS YLHPTIDETT KGTYAGLGQP ESIDYLQKLG ITAVELLPVH QFTDESYWGY NSIGFFAPQN TYSSSGMAGQ QVNEFKQMVK NLHKAGIEVI LDVVYNHTAE GNQLGPLLSF KGIDNRVYYH QVGDNPAYYM DYTGTGNTFN LSHPRVLQLV MDSLRYWVTD MHVDGFRFDL ASALIRTDEE FGTVSSFLDT VAQDPILASV KLIAEPWDIQ SYHVGGFPVS WSEWNGKYRD TLRGFWKGDE GKAAETAVRL LGSPDLYAND GRSPANSINL ITAHDGFTLN DLVSYNEKHN EANGEDNNDG SNDNLSWNCG VEGPTDDPAI NELRERQKRN FLATMLLSQG TPMLVMGDEC GRTQHGNNNG YNQDSEISWM DWHWNEAQQA LFEFTSQLTA LRQEIPLLSR RRFFDSEQIA YLLPDGGEMS NDDLHNPHTH CLALFIDGMR VTEQTEDGQD IGDEQLIWIL NAYWETVPFM IPKIGRKSKD WEVIMDTNSG KVFPKEMTVK GGHSIDVAGR SSMLLRLK
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