| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0754 |
|---|
| Symbol | |
|---|
| ID | 8724484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 919331 |
|---|
| End bp | 920809 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
|---|
| Protein accession | YP_003385616 |
|---|
| Protein GI | 284035686 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.499334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCCG TTGCGGCTTT ACTCGATGTT ACTGATGAAG AAGAAATGAT TCGTGTGCTT
CTGATTGAAG ACGACGAAGA TGATTACCTG CTGACAAAAG CGCTGGTGTC GGCCAGGGAA
AATGCAACAA TTAAGCTGGA TTGGGTAGAT AGCTATGACC TCGCCTTAGA GACTATAGAC
GCCCATAAGC ACGATGTATA TCTAGTCGAT TACCGGTTAG GACACCATAC CGGAATCGAC
CTTATCCAGG AAGCTTTTCG ACGGGGATGC CGAGCCCCAA TGATTCTGCT TACTGGTCAG
GATGATCTCA CCGTAGATCA GTCTGCGCTG GAACTGGGCG CTGCCGATTA TCTGGTTAAG
GGCCGAATCG ATGCCCAGTT GCTCGGACGC AGTATTCGTT ATGCTCTTCG CCAGGCGAGT
GTACTGGCTG AAGTAGCTCA GAAAGAGAAT AAATACCGTT CTCTGTTCGA ACGTTCGATC
GATGCCATCT TTGTTGCCAG TAATGAGCTT CGTTTTCAGG ATGCCAACTC GTCCGTCGAA
CGCTTGCTGG GCTACAGTCG TGACGAGCTG CGTATTCTTA ACCCGGCACG CCTTTTTTCG
GACCTGAATC AACTGCGCAA CCTTCGGTTC AATGTTCGGG AACACGGACA GATCAAAGAC
TTTGAAACGA CGCTTATTCA TCGAACCGGA CGCAAAAGAA TCTGTCTTAT TTCTGTGTGG
GCAGTTGAAG ACCTTATAGG CCGACCAGAA TGGTACCAGG GTATTGTACG CGATATTACC
GATGAGAAAA AGGCACAGCA GGACCTTATT CTGGCCGAAA AGCTAACGAT GACCGGTAAA
ATTGCCCGCA GTATCGCGCA CGAGGTTCGT AATCCACTCA CCAATCTTAG TCTGGCACTG
GAACAGTTAA AGGATGAACT GGATACCGAC AATGAATATG TCACTATGTT TACCGATATT
ATTGGTCGGA ACGTAGACCG TATCGGGCAA CTCATTACAG AGATGCTTAA CTCGTCGAAG
CCGCGGGATC TCGACCGTAA AAAACAGGAC TTCAACCAGG TTGTCAGAGA AACGCTCCAA
CTTGTCAGCG ACCGCATTAA GCTTAAGCGT ATGAGGCTCG AAACAAGCTT TCTGGAGGAT
GATTGTCAGG CACTCATCGA CCGGGATCAA GTGAAAACAG CTTTGCTCAA CATACTGGTC
AACGCGGTTG AAGCCATGCA GGAAGGGAAG GGTATATTAT GTGTAAAGAC AAATTGTACG
GAAGACAAAC GAGTGTATGT TGAAGTGACC GACAATGGCG GGGGAATCAG CGAAACAGAC
CGGCAGCGTT TGTTTGACCC ATTTTTTACC GGAAAATCAG GCGGAATGGG GTTGGGCCTG
ACGGCTACAC AGAACATTAT AAATAGCCAT AAAGGGTCTA TTGAGGTAGA AAGTCAGGTT
GGATTAGGAA CAACTTTTAG ACTTTACTTT CCAAAATAG
|
|---|
| Protein sequence | MTPVAALLDV TDEEEMIRVL LIEDDEDDYL LTKALVSARE NATIKLDWVD SYDLALETID
AHKHDVYLVD YRLGHHTGID LIQEAFRRGC RAPMILLTGQ DDLTVDQSAL ELGAADYLVK
GRIDAQLLGR SIRYALRQAS VLAEVAQKEN KYRSLFERSI DAIFVASNEL RFQDANSSVE
RLLGYSRDEL RILNPARLFS DLNQLRNLRF NVREHGQIKD FETTLIHRTG RKRICLISVW
AVEDLIGRPE WYQGIVRDIT DEKKAQQDLI LAEKLTMTGK IARSIAHEVR NPLTNLSLAL
EQLKDELDTD NEYVTMFTDI IGRNVDRIGQ LITEMLNSSK PRDLDRKKQD FNQVVRETLQ
LVSDRIKLKR MRLETSFLED DCQALIDRDQ VKTALLNILV NAVEAMQEGK GILCVKTNCT
EDKRVYVEVT DNGGGISETD RQRLFDPFFT GKSGGMGLGL TATQNIINSH KGSIEVESQV
GLGTTFRLYF PK
|
|---|
| |