Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0747 |
Symbol | |
ID | 8724477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 912389 |
End bp | 913606 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003385609 |
Protein GI | 284035679 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.413213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAAAC ACCCGCTTTT CCCAATAAAC AACTATCCAC TTTATACACG GTGGCTCAGG TTGCGCCGTC AGTTAGTCCC GATACCGAAT CAGTTAGTCG TTGGGCAGCT TACCAAATTT CTCAGCCCTA TCCGGATTGG TATTCAGGTC CTGACAGGCG CTTTGCTGCT GTCGGGTTTA ATGAGCTGCC ATAGTGAGTC AAAATCAGGT GAGGCATCTG CTGATCCATC ACGCCGGGAA ACCAACTTGC TCGCCACGGC TACGTTTGAT ACCGCAAAGC TAGAGAATGC CAAAAATGAG CTTAACCTGA CGGGTAAGAT TACCTTCAAC CAGGATCAGG TGGTTAAAGT GTTTCCGCTG GTAGGCGGCC ATATTGAGAC GCTGAAGGCG GACTTGGGTG ATTACGTTCG AAAGGGGCAG GTACTGGCCG TAATTCGCTC TGGTGACCTT GCCGACCTCG AACAACAGGC CGTAGCCGCT CGCGGTCAAT TTGCCGTTGC GCAGAAAAAC CAGCAGGTAA CAGAAGATAT GACCAAAGCC GGTCTTAGCT CACAGAAGGA CTTGGTAGCC AGTCAGGAAC AGCTACAAGC GGCCAAGGGC GAGCTTAACC GTGTTGCCGA ACGACGTCGG ATTGTTGGTG GTACGGGCTC TGTTTACCTC GTAAAATCTC CCATGAGTGG CTTTATCGTC GAGAAATCGG CCTCATCGGG CATGGAGCTT CGTTCCGATG ACCCCGAGAA TCTGTTTACC GTTTCTAACC TCGACCATGT TTGGGTGCTG GCTAACGTTT ACGAATCCGA CCTGGCTAAC GTACACGAAG GTGACGCAGC TACAATAACG ACCATCTCCT ACCCGGATAA GGTTTTCCAC GGACGAATTG ACAAGATTTT TAACGTCCTT GACCCCGACA GTAAAACTCT GAAAGTGCGC GTCACGCTCG ATAACGCTGA TTACCGCCTT AAGCCCGAAA TGTTTGCCAA CGTAAGCGTT ACCTATGCCG GTCGTGACCA GCGGGTAGCC ATTCCGGCGG GAGCTGTTGT GTTTGACAAA AACCGTAATT TCGTCGTATT GGTCAATAAG GAAAATCAGC CTGTTGTTCG CGAAGTCGAA ATTTACAAAA CCATCGGTAC GAAAACCTAC CTCGCAAGTG GCATTGCTCC CGGCGACCGG GTTGTAACAA CCAATCAGCT GTTAATCTAT AACGCGCTCG GAAGCTGA
|
Protein sequence | MNKHPLFPIN NYPLYTRWLR LRRQLVPIPN QLVVGQLTKF LSPIRIGIQV LTGALLLSGL MSCHSESKSG EASADPSRRE TNLLATATFD TAKLENAKNE LNLTGKITFN QDQVVKVFPL VGGHIETLKA DLGDYVRKGQ VLAVIRSGDL ADLEQQAVAA RGQFAVAQKN QQVTEDMTKA GLSSQKDLVA SQEQLQAAKG ELNRVAERRR IVGGTGSVYL VKSPMSGFIV EKSASSGMEL RSDDPENLFT VSNLDHVWVL ANVYESDLAN VHEGDAATIT TISYPDKVFH GRIDKIFNVL DPDSKTLKVR VTLDNADYRL KPEMFANVSV TYAGRDQRVA IPAGAVVFDK NRNFVVLVNK ENQPVVREVE IYKTIGTKTY LASGIAPGDR VVTTNQLLIY NALGS
|
| |