Gene Slin_0739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0739 
Symbol 
ID8724469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp896490 
End bp897242 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content53% 
IMG OID 
Producttranscriptional regulator, DeoR family 
Protein accessionYP_003385601 
Protein GI284035671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCC AACACCGGAA GCAGCTTATT TTACAAACGG TCGATGAGCG GGGCTCCGTC 
GATGTCCGAG AACTGGCCGA TTTACTACAA ACATCCGAGA TGACCGTTCG GCGCGATTTG
GTTCAACTGG CGGCTTCCGG TCTGCTGTAT CGCACGCGGG GTGGTGCTAT GAAAGTCAGC
ATGGCCACCG ACTCGTTCCG CTTTGAGCAT AAAGCCGCCG TCAACGCCGA ACGGAAGGAT
TATATCTGCC AATTGGCCGC GCAGGAAATC CGGGAGGGCG ATGTGATCTT CATGGACTGC
GGCAGTACGG TATTCCGGCT GTGCCAGTTT ATCCGCAATA AACGGATTAC GGTCGTTACA
AACTCCCTGC CTGTTGTAGC GGAGTTGATG TCGTCGGAAG TGACGGTCAA TCTGGTGGGG
GGCGAAGTAG ACAAGGAGCG GCAGGCTGTT CATGGCCTGA TGGCCGAAGA ACACATTGCC
CGCTACCGGG CGAATCGGGC GTTTATGGGC GTTGATGGCA TTTCGCTCGA ACACGGTCTG
AGTGCGAATA GCGAGAAAGA AGCCAGCATT GCGATGGCCA TTGCCCGGCA AACGGATAAA
GTTTATCTCC TCTGCGACTC GTCGAAATTA GAAACCAACA AATACCTCTA TTTTGCGCCC
CTAAGCCTGT TCGACGTATT GATTACCGAT GCCGAAGCAA AGCCGGATGT TGTATCGGCT
TACCAAAAAG CGGGTGTTAC GCTGATTCAT TAA
 
Protein sequence
MNFQHRKQLI LQTVDERGSV DVRELADLLQ TSEMTVRRDL VQLAASGLLY RTRGGAMKVS 
MATDSFRFEH KAAVNAERKD YICQLAAQEI REGDVIFMDC GSTVFRLCQF IRNKRITVVT
NSLPVVAELM SSEVTVNLVG GEVDKERQAV HGLMAEEHIA RYRANRAFMG VDGISLEHGL
SANSEKEASI AMAIARQTDK VYLLCDSSKL ETNKYLYFAP LSLFDVLITD AEAKPDVVSA
YQKAGVTLIH