Gene Slin_0732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0732 
Symbol 
ID8724462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp887302 
End bp887997 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content52% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003385594 
Protein GI284035664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATA CAGCAAAGCC CCACTTGTTG GTTGTTGAAG ACGAAACCAA AGTGGCCCTC 
TTCATAAAAA AAGGACTTGA AACGCAATCC CTCACCGTCA CCGTTGCAGC TGATGGTCGG
GAAGGCAAAC GCCTGATTAG CTCGGAACGC TTTGACCTGG TTATCCTCGA TGTCAATCTA
CCTTTTGTGA GCGGGCTGGA ATTGGCCGAA TACATACGCA CTAAAAATGC TCAAATGCCC
ATTCTGATGC TCACGGCCCT CGACTCAACC ACCGACAAAC TCATGGGATT CGAAGCCGGA
GCGGACGACT ATCTGGCCAA ACCATTCGAC TTTCTGGAGC TGGTGGCTCG CGTTCGGGCA
TTACTCCGCC GGTCGGCCCC GCCCGAAGAA AGCCAGCCCA TACTGCGGCT GGCCGATCTG
GAACTGGACC GTCAGCAAAA GGTAGCCCGA CGCGCCGGGC GAACCATCGA CCTGACCGCC
CGGGAGTTTG CCTTACTGGA CTATCTGCTG CGCAATCAGG GAAGGGTCGT ATCGCGGGTC
GATATTGCCG AACAGGTCTG GGATGTAGGT TTCGATACCG GCACTAATGT TATTGATGTG
TATGTAAATT ACCTTCGGAA CAAAATTGAC AAAGGCGAAC CTGTGAAGCT GATTCATACC
GTTGTTGGCT TCGGCTATGT GCTGAAGGAA AAATAA
 
Protein sequence
MTNTAKPHLL VVEDETKVAL FIKKGLETQS LTVTVAADGR EGKRLISSER FDLVILDVNL 
PFVSGLELAE YIRTKNAQMP ILMLTALDST TDKLMGFEAG ADDYLAKPFD FLELVARVRA
LLRRSAPPEE SQPILRLADL ELDRQQKVAR RAGRTIDLTA REFALLDYLL RNQGRVVSRV
DIAEQVWDVG FDTGTNVIDV YVNYLRNKID KGEPVKLIHT VVGFGYVLKE K