Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0703 |
Symbol | |
ID | 8724433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 859135 |
End bp | 859908 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | glycoside hydrolase family 25 |
Protein accession | YP_003385565 |
Protein GI | 284035635 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.356119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.422369 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATC GAGTTCTTTT CAATCTCATT GCTCGACGGT ATGGCCTTTG GATTGCGGGA ATTCTGTTGG TGTTAATCAC AATTTGGATC GTCAGATGGC GTCGGCCCGA GAGCATGGAC TGGCAATTTA TTCAGGCGTT TGGTATTCGA TTGCCCATGC GATACGGTAT TCATGGTATC GATGTATCAA GGCATAACGA CCGTATTGAC TGGGCGAGGG TTCGAAAAAT GGAAGCGTAT GGCGTCCGGT TACAGTTTGT CTTTATAAAA GCAACCGAGG GAGCTACCCT GTCCGACAAG CATTTTAAAA AAAATTGGCG TGAAGCCAAA AAGTCGGCCC TCCGGCGGGG AGCCTACCAT TTTTACCACC CTACCCGCGA TCCGCTCAAA CAAGCCAACA ATTTTATTCG GAACGTAGAC CTGAGCGAAG GCGATTTTGC GCCGGTTGTC GACTTTGAAG TAGTCAATGG ACAGAGCGAC GAAACAATCG TGAACGGGTT ACGCGTGTGG CTCCAGACGA TTGAGGATCA TTATCAGGCT CGCCCAATCA TTTACACCAA CGGTAACCTG TATCGACGAT ACATCAAGGG TAATCTGGAT GATTACCCCC TCTGGATCGC TGACTATTCG GCTAGTCATC TGCGCAGTTA TAACCCGGAC AAATTATACC TCTGGCAACA TAATCAGAGT GGTCTGGTAC AGGGTATTCG GGGGCAGGTT GATTTTAACG TCTTTGTTAT GGATGAAAAC CGGATGAGCG AGATATGCCT GTAA
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Protein sequence | MKNRVLFNLI ARRYGLWIAG ILLVLITIWI VRWRRPESMD WQFIQAFGIR LPMRYGIHGI DVSRHNDRID WARVRKMEAY GVRLQFVFIK ATEGATLSDK HFKKNWREAK KSALRRGAYH FYHPTRDPLK QANNFIRNVD LSEGDFAPVV DFEVVNGQSD ETIVNGLRVW LQTIEDHYQA RPIIYTNGNL YRRYIKGNLD DYPLWIADYS ASHLRSYNPD KLYLWQHNQS GLVQGIRGQV DFNVFVMDEN RMSEICL
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