Gene Slin_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0612 
Symbol 
ID8724340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp760634 
End bp761596 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content55% 
IMG OID 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding protein 
Protein accessionYP_003385475 
Protein GI284035545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGA AAATAGACAT AGGAACGGTA GGCTTGGGCT TGATGGGCAG CAGCATTGCC 
ACCTGCATCC TGGCGGCTGG CCATGCGGTT ACGTCGCTGA TCAAAGAGAT TGACACGGCC
GACGAAGCGC GGGTCCGCAT CCTGGGTTAC CTGCATCAGC TCGATCAGGA AGGTTTGTTA
CTCGAAACGC CCGAACAGAT CATCGAGCGG CTTACCATCA CCGACGATGT TTCGTTACTG
AGCGATCATA CCATTGTGAT TGAGTCGATT ACGGAGAGCC TGGACGAGAA GAAAGCCCTC
TATCACCAAC TGGAAGCGGT TCTCTCCCCT ACCGCCATCA TTGGCAGCAA CACCTCGGCC
ATTCCGGTAT CGGTATTGCA GAGCGGCCTG AAGCACCCCG AACGGCTGCT TGGAATCCAC
TGGGCCGAAC CGGCGCACAT TACCCGGTTT ATGGAAGTCA TTTGCGGCAA AGACTCCGAT
CCGGCTTCGG CCAGCGAGAT CGTCGCCCTG GCCGAAAGCT GGGGAAAAGA GCCTTCGCTG
CTCAGGAAAG ACATTCGGGG GTTCATTACC AACCGGATCA TGTACGCCAT GCTCCGGGAA
TCGTTCCATC TGGTCGAAAA TGGCTACGCC ACCATCGAAG ATGTGGACCG CTCACTTCGC
AATGACCTGG GCTACTGGAT CACCTTCGCC GGGCCGTTCC GGTTCATGGA CCTCACCGGC
ATCCCGGCTT ACCTGACCGT CATGAAAGAC CTTTTTCCGG AACTGAGTAA CAACCCCGTA
ACCCCGAAGC TGATGGAAGA GCTGGTGGCG TCGGGCGCCA AAGGTGTACA GAATGCGCAG
GGTTTTTACC CCTATACGCC CGAATCGGCT AAAGAGTGGG AAGAGAAATT CATCGATTTC
AGCTACGATA TACGGAAGCT GGCCCAAAAA TATACCCCAA CCCCTGCCGA AGAAGCAAAA
TGA
 
Protein sequence
MTQKIDIGTV GLGLMGSSIA TCILAAGHAV TSLIKEIDTA DEARVRILGY LHQLDQEGLL 
LETPEQIIER LTITDDVSLL SDHTIVIESI TESLDEKKAL YHQLEAVLSP TAIIGSNTSA
IPVSVLQSGL KHPERLLGIH WAEPAHITRF MEVICGKDSD PASASEIVAL AESWGKEPSL
LRKDIRGFIT NRIMYAMLRE SFHLVENGYA TIEDVDRSLR NDLGYWITFA GPFRFMDLTG
IPAYLTVMKD LFPELSNNPV TPKLMEELVA SGAKGVQNAQ GFYPYTPESA KEWEEKFIDF
SYDIRKLAQK YTPTPAEEAK