Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0600 |
Symbol | |
ID | 8724328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 744768 |
End bp | 746453 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | Deoxyribodipyrimidine photo-lyase |
Protein accession | YP_003385463 |
Protein GI | 284035533 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACAAAG GAGCCCCTCT ACCCTCCATA CCTGACCGGC CAACCATTAA CATACTCTGG TTCAAGCGGG ACCTGCGCCT ACGCGACCAC GCCCCCCTCC AGGCAGCTAT TGCCATGGGG CAGCGTGCTC CCAAACGGCC CTTGCTCCTG CTGTACTGTT TCGAGCCATC GCTCATTGCC GATCCCAATT ACGACCTTCG CCACTGGCGA TTCGTCTACG AATGTCTGGC AGACCTCCGC AAGCAGTTGG CGACTGTACC TCCGCCCGCT CCGTCGGACA CGGGCCGTCT GGTGCACGAG TGGCTGCCGT TTGAGTTCGA CGATCAGGCG GATGATCATC AACCGGAAAC GGGCCTTCCC ACCGTTTGGG TATTTCATCG GGAGGTAACC GACGTGCTAA CCGCGCTTCA GACACAGTTC ACCATTGGTT CGATCTTCTC CTATCAGGAA ACGGGCCTGG CCGTTACCTA CGACCGCGAT AAAGCGGTTG CCCAATTTTG CCGGCAACAG GGGATTGGCT GGCAGGAATT TCAAAACAAT GGCGTGTTCC GACGCCTGAA AAATCGGGAT ACCTGGGCAG CACAGTGGCA GCAGACCATG CAGCAACCCC AACAGCATCC GGACCTGACG GCCTGGTACC CCGCCGATGT ACCCCCAGAC TGGTTTGAAG CCGAACGCGG CCCGGATTTA CCGGCAGCGT GGCAACGGCC AAATCCGTCG TTTCAGCCCG GCGGGGAATA CAATGGGCAT CGGTATCTGG CCAGCTTTCT TCAGGAGCGA ATCGCCTTGT ACGCGGCTTC CATCTCCAAA CCCCTCGCAA GCCGCCGAGG GTGCAGTCGT CTGTCGCCTT ACCTGGCCTG GGGTTGTTTG AGTATCCGGC AGGTATACCA GGCTCAGCAG CAGGCCGCTA AAAAACCGCA ACTGGCAGGG TTGCGACGGC AGTTGGCGGC ATTTGCCTCC CGGCTGCGCT GGCATTGCCA TTTCATCCAA AAGTTTGAGC GTGAAGAGCG GATGGAATTC GAGAACGTGA ACCGGGCTTT CGATGCCGTC CCCAAAAACG TCAACCCCGA CCATTATGCA GCCTGGCGGG ATGGGCGCAC GGGGTATCCG CTCGTCGACG CCTGTATGCG CTGTCTGGCC GCTACGGGCT ATATCAATTT TCGCATGCGA GCCATGTTGA CCTCCTTTCT GACCCACCAT CTGTTTCAGC ATTGGCAGGA AGGGGGCTGG CACCTGGCTC GGCTCTATAC CGATTTCGAG CCGGGTATTC ATTACGCCCA GCTTCAGATG CAGTCGGGCA TGACGGGGAC CAATACCATC CGAATTTATA ATCCCGTCAA ACAGTCGCAG GAACATGACC CGCAGGGCGT ATTCATCAAA CAGTGGGTGC CCGAACTGGC CAACTGCCCC ACAGCTTACA TTCACCAGCC GTGGACGATG CCTCCGCTGG AACAGGCGAT GGAGCACTTT CAGATCGGCA TCGACTACCC CGCCCCGATC ATTGATGCAG CCGCGATGGC CCGCCGGGCC CGCATACAAC TCCACGAGCC CCGCCAGACG GAGGTGGGGC TGGCCGAGCA GACCCGTATT TTAACAACGC ATAGCTTACC CGCTACGGAT CGAGCCAACC GAAAAGAACG AAAATCGGGA CAAAAGTCGT CGATTAAACA GGCCGCTAAT CCTTAG
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Protein sequence | MDKGAPLPSI PDRPTINILW FKRDLRLRDH APLQAAIAMG QRAPKRPLLL LYCFEPSLIA DPNYDLRHWR FVYECLADLR KQLATVPPPA PSDTGRLVHE WLPFEFDDQA DDHQPETGLP TVWVFHREVT DVLTALQTQF TIGSIFSYQE TGLAVTYDRD KAVAQFCRQQ GIGWQEFQNN GVFRRLKNRD TWAAQWQQTM QQPQQHPDLT AWYPADVPPD WFEAERGPDL PAAWQRPNPS FQPGGEYNGH RYLASFLQER IALYAASISK PLASRRGCSR LSPYLAWGCL SIRQVYQAQQ QAAKKPQLAG LRRQLAAFAS RLRWHCHFIQ KFEREERMEF ENVNRAFDAV PKNVNPDHYA AWRDGRTGYP LVDACMRCLA ATGYINFRMR AMLTSFLTHH LFQHWQEGGW HLARLYTDFE PGIHYAQLQM QSGMTGTNTI RIYNPVKQSQ EHDPQGVFIK QWVPELANCP TAYIHQPWTM PPLEQAMEHF QIGIDYPAPI IDAAAMARRA RIQLHEPRQT EVGLAEQTRI LTTHSLPATD RANRKERKSG QKSSIKQAAN P
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