| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0536 |
|---|
| Symbol | |
|---|
| ID | 8724264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 657906 |
|---|
| End bp | 659087 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | glycoside hydrolase family 43 |
|---|
| Protein accession | YP_003385399 |
|---|
| Protein GI | 284035469 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.812392 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT CACTGCTCCT GTTTTTCGTA TTGACTACCC TGCTTTTGCG CCACACTTCG
GCGCAAACCA CACAAAGCGA GGGTAAAGCC AAAGCCTCTT TTTCTAACCC CCTGCCCATC
CAGTTCGGCG ACCCTTATAT TTTACATACG AAGGATATGT ACTATATGTA TGGCACCGGC
GGAGGAGCAG ATAAGGGGTT TTCAGCTTAT TCCTCAAAAG ATATGGTGAA CTGGAAACCG
GAAGGACAGG TTTATTATCA CAATAACAAA AACGGCTGGA GCGACCCCAA AGCAAGCTGG
GGCGGTGCTT ACTGGGCACC GGAAGTATAT GAAGTAAAGG GTAAATTTTA CCTGTTCTAC
AGCGCCCAGT GGAAAGTGAA CCCAACCAAA GAGCTGGAAA ACTTCCGGAT TGGGGTAGCC
GTATCCGACA AACCTACCGG TCCTTTCGTT GACCTGTCCA GCAAACCCGT TTTCGACCCC
GGTTATCCGG TTATCGATGC CAACGTGTTC TTCGATACTA ACGGAAAAGC CTATTTATAC
TTTTCGCGTT GCTGCTACAA ACACCCGGTC AAAAGTGAAA TAGCTGATCT GGCTAAAAAG
AACGGCTGGT TCAACGAGAT CGAGGAAAGC TGGGTATACG GGGTTGAACT CAAACCCGAC
TTTTCCGGCG TCATTGGCCA ACCGGTTCTT GTACTGCGCC CCCCGGTTCG CCTGAGCGAT
AAGCAGGCCG AATGGGAAAG CCGCTCCGTA ACGGCCCGTG AAGTAAACCG CCGTTGGACC
GAAGGCTCGG TTACGTTCAA AAAAGACAAC CTGTACTACA TTATGTATTC GGCTAACCAT
TTCGGCGGAC AGAACTATGC CATCGGCTAC GCCACAGCAA CCTCGCCTTT GGGTCCGTTC
AGGAAAGCAG CTAACAACCC GGTTTTGCAG AAAAACACCG ACAAGGGCGG CTCAGTGACG
GGTACGGGGC ACAACAGCGT AACGTACTCG CCGGATGGAA AAGAAATGTT CTGTGTCTAC
CACGCCAGAA CGGCCAAAAC CGGCGACGAA CGAGTGGTTT GCATTGACCG CATGCAGGTT
AAAAACGGAA TCATAACGAT CTCTGGCCCT ACCACCACAC CCCAGAAACT TCCTTCAGGC
ACACCAACGG CAACGGCGGG CAGCCAATCC AAAGGTGAGT AA
|
|---|
| Protein sequence | MKKSLLLFFV LTTLLLRHTS AQTTQSEGKA KASFSNPLPI QFGDPYILHT KDMYYMYGTG
GGADKGFSAY SSKDMVNWKP EGQVYYHNNK NGWSDPKASW GGAYWAPEVY EVKGKFYLFY
SAQWKVNPTK ELENFRIGVA VSDKPTGPFV DLSSKPVFDP GYPVIDANVF FDTNGKAYLY
FSRCCYKHPV KSEIADLAKK NGWFNEIEES WVYGVELKPD FSGVIGQPVL VLRPPVRLSD
KQAEWESRSV TAREVNRRWT EGSVTFKKDN LYYIMYSANH FGGQNYAIGY ATATSPLGPF
RKAANNPVLQ KNTDKGGSVT GTGHNSVTYS PDGKEMFCVY HARTAKTGDE RVVCIDRMQV
KNGIITISGP TTTPQKLPSG TPTATAGSQS KGE
|
|---|
| |