| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0495 |
|---|
| Symbol | |
|---|
| ID | 8724223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 609621 |
|---|
| End bp | 612242 |
|---|
| Gene Length | 2622 bp |
|---|
| Protein Length | 873 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | ATP-dependent chaperone ClpB |
|---|
| Protein accession | YP_003385358 |
|---|
| Protein GI | 284035428 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.520462 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTTA AGAATTACAC CATAAAAGCA CAGGAGGTCG TGCAGAAGGC ATCGGAGATT
GCCCTCGGCA ACGGCCAGCA AAGTATTGAA ACGGGGCATC TGCTCCAGGC CATTCTGTCG
GAAGATGAAA ACGTTGTCGG ATTCATCGCC AAAAAGACCA GCGTTAACTT ACAAAACACC
AATGCTGCTC TACAGGCCAT TCTGACCACC TATCCGAAAG TGTCGGGCGG TAATAATGGT
GTTTACCTGA GCAACGATAC AGCGGCTGCC CTGGCCAAAG CCAGCAGTTA CACCAAGGAA
TTCGGTGATG AATTTGTGAG CGTCGAGCTT ATGCTGCTGG GACTTATGGG CGGCAAAGAC
CAAATTGCAA CGTTATTGAA AGACGCCGGT TTCAACGAGA AACAAACGAA AGCGGCCATC
AACGAACTTA GAAAAGGAAA TTCGGTGAAA GACCAGAACG CAGAAGCAAA ATATCAATCT
CTGGAGCGGT ACAGCATTAA CCTGAATGAA CGCGCCCGGA CGGGTAAAAT CGACCCAGTG
ATTGGCCGAG ACGAAGAAAT TCGCCGGGTG CTGCAAATCC TGAGCCGCCG TACCAAAAAC
AACCCGATCC TGCTCGGTGA GCCGGGCGTT GGTAAAACCG CCATTGTGGA AGGACTCGCC
CAGCGGATTG TTTCGGGCGA CGTTCCGGAA AACCTGAAAA CCAAAACCAT CGTCTCGCTC
GACATGGGTC TGCTCATTGC GGGTGCCAAG TATAAAGGCG AGTTCGAAGA ACGTCTGAAA
GCCGTTATTA AAGAGGTTAC GGATTCGGAC GGCGAGATCA TTCTCTTTAT CGACGAGATT
CACACGCTCG TTGGTGCGGG AGCCGGTGGC GAAGGCGCAA TGGATGCCGC CAATCTGCTC
AAACCAGCCC TGTCGCGTGG CGAACTGCAC ACCATTGGCG CCACCACGCT GAAAGAGTAT
CAGAAATACA TCGAGAAAGA TAAAGCCCTC GAACGCCGTT TTCAGGCCGT TATCGTCGAC
GAACCCGATA TGGCCGATGC CATTTCGATT CTTCGCGGAA TCAAGGACAA GTATGAACTC
CACCACGGTG TTCGGATCAA AGACGATGCG GTCATTGCGG CCGTTGAACT CTCGACCCGT
TACATCACCG ACCGTTTTCT GCCCGACAAA GCCATTGATC TGATGGACGA AGCAGCCGCC
AAGCTCCGTC TGGAAATGGA CTCCGTACCT GAAGAACTCG ACGAGCTGAA CCGCCGGATT
ATGCAGTTGG AGATTGAGCG GGAAGCCATC CGTCGCGAAA ACGACAAGGA AAAGGAAACG
GTGCTGAACA AGCAGATCGA AGACCTCAGC GAGCAACGCA ACGACCTCAG AGCCCGATGG
GAAACCGAAA AAGCATCAGT CAACGAAGGC CGGACACTGA AAGAGCAACT CGATCAGTTG
CGCTTCGAAG CCGAACAGGC CGAACGTTCC GGCGACTATG GTAAGGTAGC CGAAATTCGC
TACGGTCGCA TTCCCGAGAT AGAAAACAAG CTGAACACGT TGTCGAAAGA AGGAAACGGC
AATGATTCGT CGGACCGGAT GATGCAGGAA GAAGTTACGG CCGAGGACAT TGCCGAGGTA
GTAGCCAAAT GGACGGGTAT CCCTGTGTCG AAGATGCTCC AGAGCGACCG CGAAAAGCTG
CTCAATCTGG AAAAAGAATT GGGCAAACGC GTAGCCGGAC AAGCCGAGGC TATTGAGGTT
GTGGCCGATG CCGTTCGTCG GAGCCGGGCC GGCATGCAGG ACCCCAAACG GCCAATCGGT
TCGTTCATCT TCCTCGGCAC AACCGGGGTC GGTAAGACGG AGGTAGCCCG TACGCTGGCC
GAATACCTAT TCAATGATGA GAATGCGCTG GTGCGGATCG ACATGTCGGA GTACCAGGAA
CGCCACGCCG TCAGCCGACT GATTGGTGCC CCTCCGGGCT ATGTGGGTTA CGACGAAGGC
GGTCAGCTGA CCGAAGCCGT TCGCCGGAAG CCCTACTCAG TGGTGCTGCT CGATGAGATT
GAAAAAGCGC ACCCTGATGT CTGGAACATC CTGCTGCAAG TGCTCGACGA TGGTCGCCTG
ACCGACAACA AAGGCCGTGT GGCGAACTTC AAGAACACGA TCATCATCAT GACCTCGAAC
ATCGGCAGCC ACCTGATTCA GGAGAAATTT GCTGAAGACG AAGGCTGGAA CCACTCACTG
GTACTGGAAG AAGCTAAATC GGCGGTGATG GAGTTGCTGA AACAAACCAT CCGCCCCGAG
TTCCTGAACC GGATTGACGA GATTGTGATG TTCGAACCGC TGACCAAAGC CAACATCCGC
AAGATTGTCG ACATTCAGTT CCGCCAGATC AAGCAGCGCC TGGCCGAAAA CGGCATCCAA
CTCGATGCCA CTGACGAAGC GCTCACCAAA CTTGGCGAAG AAGGGTTCGA CCCGCAGTTT
GGTGCCCGTC CGCTGAAACG GGTTCTGCAA CGCCGAATCC TCAACGAACT GTCGAAGAGC
ATCCTGTCGG GTGAAGTCAA AAAAGACTCT GTCGTACTGA TGGAGCTGAA CCAGGATGGT
GAGATCGCCT TCACCAATCT GGACGCTGAG ATCGAGCTGT AA
|
|---|
| Protein sequence | MDFKNYTIKA QEVVQKASEI ALGNGQQSIE TGHLLQAILS EDENVVGFIA KKTSVNLQNT
NAALQAILTT YPKVSGGNNG VYLSNDTAAA LAKASSYTKE FGDEFVSVEL MLLGLMGGKD
QIATLLKDAG FNEKQTKAAI NELRKGNSVK DQNAEAKYQS LERYSINLNE RARTGKIDPV
IGRDEEIRRV LQILSRRTKN NPILLGEPGV GKTAIVEGLA QRIVSGDVPE NLKTKTIVSL
DMGLLIAGAK YKGEFEERLK AVIKEVTDSD GEIILFIDEI HTLVGAGAGG EGAMDAANLL
KPALSRGELH TIGATTLKEY QKYIEKDKAL ERRFQAVIVD EPDMADAISI LRGIKDKYEL
HHGVRIKDDA VIAAVELSTR YITDRFLPDK AIDLMDEAAA KLRLEMDSVP EELDELNRRI
MQLEIEREAI RRENDKEKET VLNKQIEDLS EQRNDLRARW ETEKASVNEG RTLKEQLDQL
RFEAEQAERS GDYGKVAEIR YGRIPEIENK LNTLSKEGNG NDSSDRMMQE EVTAEDIAEV
VAKWTGIPVS KMLQSDREKL LNLEKELGKR VAGQAEAIEV VADAVRRSRA GMQDPKRPIG
SFIFLGTTGV GKTEVARTLA EYLFNDENAL VRIDMSEYQE RHAVSRLIGA PPGYVGYDEG
GQLTEAVRRK PYSVVLLDEI EKAHPDVWNI LLQVLDDGRL TDNKGRVANF KNTIIIMTSN
IGSHLIQEKF AEDEGWNHSL VLEEAKSAVM ELLKQTIRPE FLNRIDEIVM FEPLTKANIR
KIVDIQFRQI KQRLAENGIQ LDATDEALTK LGEEGFDPQF GARPLKRVLQ RRILNELSKS
ILSGEVKKDS VVLMELNQDG EIAFTNLDAE IEL
|
|---|
| |