Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0380 |
Symbol | |
ID | 8724108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 480343 |
End bp | 482109 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | protein of unknown function DUF885 |
Protein accession | YP_003385243 |
Protein GI | 284035313 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.550546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTTT CCATTCGTCA ATGCGCTGGT CTCAGCCTGG CCTTTATCTG CTTACACCTA TCGCTCAGGG CACAAACGCC GTCGGAGCAA CTTCGTCAGG TTATCGACAG CACCTGGGCG TTTGAACTGC GGGAACACCC ATTGACGGCC GTTTTTGCGG GCAAAAAGAC CCAGATCGAA AGCCTGGGAT CTTATACCGA AGCCGCCATG GCTCGGCAAA CCGCTTTTTA CCGGAATCAG CTGGCCAAGC TCAACGCCAT TCCATCGGCA GCCCTTTCGG GACCCGAGCG CGTCAATGCC GAACTACTCC GGTACACAAT GGAAGACGAT ATTGAACAGT ACAACCTGAA AGGGTATCTG AATCCCTTCA CCTCCGACTC CGGTCCGCAT ACGTCTTTAC CGTTTATATC CAACTATCTC ACCTTCCGTA CCGCAGCCGA TTATGAAAGC TATATCAAAC TACTTTACAC CTTCCCGGCC TACCTCTCGG ATGTCGTAAC CCTGTTGCGC GAAGGGTTAC GCACGGGTAT GACGGCCCCT AAAATCACGC TGAAAGGCTA CGAAATAACG TACAGAAACC ACATTGTTAC GGACCCCACC CGCAGTGTTT TTTACGGGCC ATTCCTGCAC TTTCCGGCGT CGATCAGCCC CGAAGAGCAG GCGCGTTTAC AGCAGGCCGG TCAGAAAGCG GTTATGGACG GCGTGGTTAA AGGCTATACT ATGTTCGGTG CCTTTATGGA TACAGCCTAT TTGCCGGGTG CCCGCACCAC GCTGGCCGCC AATGCGTTAC CCAACGGCAC CGCGTTTTAT CAGCAGCGTA TCCGCTATTA CACAACCCTC GACCTATCGG CCGATGCCGA TGCCATTCAC CAGTTAGGCT TACAGGAGGT AGCCCGGATT CAGGCGGAGA TGCAGGCACT CATCACGCAA ACCGGGTTTA AGGGTTCGTT TCAGGAGTTT CTGAAGTTTC TGCGTACTGA CCCTCAGTTC TACGCCAAAA CGCCCGTACA ACTCCTTAAA GAAGCCAGTT ACATTGCCAA ACAGGCCGAC GATAAGCTGC CGGCGTTTTT TGGCAAACTT CCCCGGCAAC CGTATGGCGT TGCTCCCGTT CCCGACGCTC TGGCGCCCAA ATACACCAGC GGGCGATACG TGGGAGCGCC CATCAGCAGC AAAACACCGG GCTACTACTG GGTCAATACG TACAATCTGG CAAGTCGGCC GTTGTACACA CTGGAAGCAC TGACCCTGCA CGAAGCCGTA CCGGGCCATC ACCTGCAATC GGCCTTATCG CAGGAATTGA CCGGCCTGCC CGACTTCCGG AAACGCCTTT ACGTCGATTC GTTCGGCGAG GGCTGGGGCC TGTACTGCGA ATGGCTGGGT AAAGAGATGG GCTTCTACAA AGATCCGTAC AGCGATTTTG GGCGACTCAC CTTCGAAATG TGGCGGGCCT GCCGGTTGGT AGTCGACACG GGTATCCATA CAAAAGGCTG GACCCGGCAG CAGGTAATCG ACTATTTATC ATCCCATACG GCCCTGTCTA TCCACGACTG CACCACCGAA ACAGACCGAT ACATCTCCTG GCCCGGTCAG GCTTTGGCCT ATAAAATTGG CGAGTTAAAA ATCAAGGAAC TACGACAGAA GGCGCAAAAG GCACTTGGCG ACAAGTTTGA TGTACGCGTT TTCCATGACC TTATTTTAAG CCAGGGCACC GTAACCATGC CGATCCTCGA ACGCATTGTC GATGAATACA TTAAGGCTGC CCGATAG
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Protein sequence | MSFSIRQCAG LSLAFICLHL SLRAQTPSEQ LRQVIDSTWA FELREHPLTA VFAGKKTQIE SLGSYTEAAM ARQTAFYRNQ LAKLNAIPSA ALSGPERVNA ELLRYTMEDD IEQYNLKGYL NPFTSDSGPH TSLPFISNYL TFRTAADYES YIKLLYTFPA YLSDVVTLLR EGLRTGMTAP KITLKGYEIT YRNHIVTDPT RSVFYGPFLH FPASISPEEQ ARLQQAGQKA VMDGVVKGYT MFGAFMDTAY LPGARTTLAA NALPNGTAFY QQRIRYYTTL DLSADADAIH QLGLQEVARI QAEMQALITQ TGFKGSFQEF LKFLRTDPQF YAKTPVQLLK EASYIAKQAD DKLPAFFGKL PRQPYGVAPV PDALAPKYTS GRYVGAPISS KTPGYYWVNT YNLASRPLYT LEALTLHEAV PGHHLQSALS QELTGLPDFR KRLYVDSFGE GWGLYCEWLG KEMGFYKDPY SDFGRLTFEM WRACRLVVDT GIHTKGWTRQ QVIDYLSSHT ALSIHDCTTE TDRYISWPGQ ALAYKIGELK IKELRQKAQK ALGDKFDVRV FHDLILSQGT VTMPILERIV DEYIKAAR
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