Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0330 |
Symbol | |
ID | 8724058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 420960 |
End bp | 421724 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | two component transcriptional regulator, LytTR family |
Protein accession | YP_003385193 |
Protein GI | 284035263 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.489053 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTTT CCTGCATTGC CGTCGATGAT GAGCCGCTGG CATTAGGCCT TGTTTGTGCC TTCATTGAAA AAACGCCTTT TCTCCAGTTA GCCGGTCGCT ACAGCAGCGC TGTCGAAGCC TTAGAGGGGT TACTATCCGG CCCTCCCGTG AATGTAGTTT TCCTGGACAT CCAAATGCCG GACCTGACCG GTCTGGAACT GGCCCGCGTT CTGGAGCGGA GTAACCGGGG GGCGCACACG ACACGAATTG TCTTTACCAC CGCTTTCGAT CAGTTTGCGC TCGATGGCTT TCGAGTCGAT GCGCTGGACT ACTTGCTGAA GCCGTTCAAC TACGAAGAAT TTTTACGGGC AGCGAGTAAA GCCCGGCAGT ATTTTGATCT GGTTCAGCGG ACGGAACCAG TCCCGGCGGC TCAGGTTCTG GCCGCTCCCA ACGAAATAGC CGACGATCAC CTCTTTCTAA AAGTCGAATA CCAATTGGTT CGCATTGCTT ACAACGACAT TTTATACATT GAAGGACTGA AGGATTACGT GAAAGTATAT CGGCAAAGTG AGCCGGATAA GCCTTTGCTA TCGCTGACTA GTTTGAAGGG GCTGGAAGAA AAATTGCCAG CCAATCAGTT CATGCGGGTT CACCGGTCGT TTATTATCTC GCTACAACGG ATCAGCGCGT TTACCCGGAA CTCCGTCCAG ATCGGTTCGG TGGTCATACC CGTCAGCGAT CAGTACAAAG ATGTTTTTGG CCAGTTCATT GCCCGCTGGC TATAA
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Protein sequence | MTLSCIAVDD EPLALGLVCA FIEKTPFLQL AGRYSSAVEA LEGLLSGPPV NVVFLDIQMP DLTGLELARV LERSNRGAHT TRIVFTTAFD QFALDGFRVD ALDYLLKPFN YEEFLRAASK ARQYFDLVQR TEPVPAAQVL AAPNEIADDH LFLKVEYQLV RIAYNDILYI EGLKDYVKVY RQSEPDKPLL SLTSLKGLEE KLPANQFMRV HRSFIISLQR ISAFTRNSVQ IGSVVIPVSD QYKDVFGQFI ARWL
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