Gene Slin_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0267 
Symbol 
ID8723995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp350570 
End bp351232 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content47% 
IMG OID 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_003385131 
Protein GI284035201 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.583067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.103324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTG TAATTTTTGA CATGGATGGG GTCATTGTTG ATACAAACCC GCATCACCGC 
ATCGCCTGGC GCGAGTACTA CCAACGCTAC GGTAAAACAT TGAGTGATCA GGACTTTGTG
CAGTATGTTT CAGGAAAGCA TAACGACGAT ATACTAAGGC ACCTTTTTGC CGGGCAAGAT
TTAACCGCCG ACGAAGCAAA ACGGCTGGCC CACGAAAAAG AAGCCCTGTT TCGGGAATTA
TACCAACAAT CGATTACACC AATTGAGGGC CTGATCCCAT TTTTAAAGAC ATTAAAAGAG
GCCAATATGC TTACGGCTGT GGCCACGTCG GCTCCAGTTG AGAATCTCGA CTTCATTATG
GATGCACTCG GGATTCGCTC TTATTTTGAC GTATTGCTAA ACGAAAGCAT GGTTAGCCAT
CCTAAGCCTG ACCCTGAGAT TTATCAGAAA GCCATGGGTT TGCTGGGCGT AGAGCCAACG
GACAGCGTTA TTTTTGAAGA CTCAATGACG GGTATTCAGG CCGCTAAAGC CGCCGGAGCC
CTGGTGGTTG GAATGGCCAC TACACAAGCA CCTGATGAGC TATGGCCGTT CGTCGACGAC
GTTGCGCATG ACTTTACAGA TATGACCGTA GATCGACTGG AAAAACTGGT TAAGGTTTTT
TAA
 
Protein sequence
MKAVIFDMDG VIVDTNPHHR IAWREYYQRY GKTLSDQDFV QYVSGKHNDD ILRHLFAGQD 
LTADEAKRLA HEKEALFREL YQQSITPIEG LIPFLKTLKE ANMLTAVATS APVENLDFIM
DALGIRSYFD VLLNESMVSH PKPDPEIYQK AMGLLGVEPT DSVIFEDSMT GIQAAKAAGA
LVVGMATTQA PDELWPFVDD VAHDFTDMTV DRLEKLVKVF