Gene Slin_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0254 
Symbol 
ID8723982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp334182 
End bp335261 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content50% 
IMG OID 
Productfructose-bisphosphate aldolase, class II 
Protein accessionYP_003385118 
Protein GI284035188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0117371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAG TAGCCACCCG TTTTGCTCCC GGTGTTGTGA CCGGCGAAGG CGTTACCGAA 
ATTTTCCGTC ACGCCAACGA AAATGATTAC GCCCTTCCCG CCGTCAATGT TGTTGGCACG
GACTCCGTCA ACGCCGTACT GGAAACAGCT AAAGCGGTTA ACTCTCCGGT AATCGTTCAG
TTCTCGAACG GTGGAGGTAT TTTTTATGCT GGTAAGTCGC TGCCGAACGA TAAGCAACAG
GCGGCTATTG CCGGTTCTAT CTCAGGCGCT TTGCACGTTC ATCACATCGC TGAGCTGTAT
GGCGTACCCG TTATTCTGCA TACCGACCAC TGCGCCAAAA AACTGCTACC CTGGATTGAT
GGCCTGCTGG CCGCCGGTGA AAAGCATTTT GACCAAACGG GCAAACCACT GTACTCTTCG
CATATGCTCG ACCTATCGGA GGAGCCGATT GAAGAGAACA TCGAAATCTG TTCGAAATAC
TTTGAGCGTA TGGCCAAAAT TGGCATGACA CTCGAAATTG AACTGGGTGT AACGGGTGGA
GAAGAAGATG GCGTCGATAA CACAGATGTT GATGATTCTA AACTGTATAC CCAGCCTTCT
GAAGTAGCTT ATGCTTACGA AGAGCTGAGC AAAATTTCGC CAAACTTCAC GATTGCCGCT
GCTTTCGGTA ACGTACACGG TGTATATAAG CCCGGTAACG TGAAGCTGTC GCCAATCATT
CTGGACAACT CTCAGAAATA CATTCAGGAG AAATACAACA CTGGACCGCT GCCAGTGAAC
TTCGTATTCC ACGGTGGATC GGGCTCAAGC CGCGAAGAAA TCCGGGAAGC CATCCGCTAC
GGTGCCGTGA AAATGAACCT CGATACCGAC ATGCAGTGGG CTATGTGGGA AGGCATCCTG
AAATACTACA AGTCGAAAGA AGGCTACCTG CAATCCCAGC TGGGTAACCC CGAAGGTGCC
GATTCGCCAA ACAAAAAATA CTACGATCCA CGCGTGTGGC TGCGTAAAGG CGAAGAGAGC
ATGGTACAAC GCCTGAAAAT TGCGTTTGAA GATTTGAACT GCATCAACCG GCTGGCCTAG
 
Protein sequence
MSEVATRFAP GVVTGEGVTE IFRHANENDY ALPAVNVVGT DSVNAVLETA KAVNSPVIVQ 
FSNGGGIFYA GKSLPNDKQQ AAIAGSISGA LHVHHIAELY GVPVILHTDH CAKKLLPWID
GLLAAGEKHF DQTGKPLYSS HMLDLSEEPI EENIEICSKY FERMAKIGMT LEIELGVTGG
EEDGVDNTDV DDSKLYTQPS EVAYAYEELS KISPNFTIAA AFGNVHGVYK PGNVKLSPII
LDNSQKYIQE KYNTGPLPVN FVFHGGSGSS REEIREAIRY GAVKMNLDTD MQWAMWEGIL
KYYKSKEGYL QSQLGNPEGA DSPNKKYYDP RVWLRKGEES MVQRLKIAFE DLNCINRLA