Gene Slin_0248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0248 
Symbol 
ID8723976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp326019 
End bp326798 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content52% 
IMG OID 
ProductO-methyltransferase-like protein 
Protein accessionYP_003385112 
Protein GI284035182 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000493132 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGTTACTCG CTTATCTCCG GTATTTGAGT CGCGCCCGCG ACGAACATTC GCTTCATTCC 
CCATTTCTCT TTTCTCTTTA CGTTCAGGTC ATCCGGGCAA AAACCGGATC CAGAGCACTG
TTTGCGCCTA TACGGGCACT CAGAAAAGAA CTTCGTAAAA GTCGTCAGCT TATTACAATC
GCCGATTTAG GAGCGGGGTC CAAAGTGAAT CCATCCCGGC AGCGAACCAT TGGCGATATT
GCCCGGAACT CCCAGAAACC GGCACGCTTC GGTCGGCTCC TGTTTCGGCT GATTCGGCGC
TTCGAGGCCA AAGTCGTGGT TGATCTGGGC ACATCGCTGG GCATGACAAC GGCTTACCTG
GCCGAAGCCA CTAAACCGTA CGGTGGTCAG GTGCTGACGT TTGAAGGCTG CCCGGAAACG
GCGGCCGTAG CCCGGCAGAA TTTCGAGCGG TTAGCTATGC AGAACGTCGA GGTAGTTGTT
GGCAATCTGG ATGAAACCCT GCTACCCGCC ATCGGCGGAC TGCCTCCCGT TGATTTTGTC
TTTTTCGATG CCAACCACCG GTATGAGCCA ACGGTACGCT ATTTCGAAAC CTGCCTGACC
AATATTCATA ATGATACCGT ATTCGTTTTC GACGATATAC ACTGGTCGGA CGAAATGGAG
CAGGCATGGG CTTACCTCAA GGCGCACAAA GCCGTTAGTG TAACGGTCGA TTTGTTTTGG
GTGGGGCTAG TATTTTTTCG GAAGGAACAG CCAAAACAGG ATTTCGTTCT TTGGTTTTGA
 
Protein sequence
MLLAYLRYLS RARDEHSLHS PFLFSLYVQV IRAKTGSRAL FAPIRALRKE LRKSRQLITI 
ADLGAGSKVN PSRQRTIGDI ARNSQKPARF GRLLFRLIRR FEAKVVVDLG TSLGMTTAYL
AEATKPYGGQ VLTFEGCPET AAVARQNFER LAMQNVEVVV GNLDETLLPA IGGLPPVDFV
FFDANHRYEP TVRYFETCLT NIHNDTVFVF DDIHWSDEME QAWAYLKAHK AVSVTVDLFW
VGLVFFRKEQ PKQDFVLWF