| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0197 |
|---|
| Symbol | |
|---|
| ID | 8723925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 262073 |
|---|
| End bp | 262915 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003385061 |
|---|
| Protein GI | 284035131 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.824425 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAG CATTGATCAC GGGTGCAAAC GTCGGCATAG GACTGGCAAC CGCAAAAGCA
CTGGCCCGGC AGGGTTTCAA CCTGATTCTG CTTTGCCGGA ACGAAGCAAA AGGCGAGGAA
GCGGTAACAG CGATAAAACG CATCAACCCG GCCGTAACGG TCGAACTGGT ACTCGCCGAT
TTAACGGATA CTGATTCGAT ACGTCGGGCG GCTGAACAAG TCAGGGCTAC GCATAGACAG
CTGGATGTGC TGATCAATAA CGCCGGGTAT TCACCCGACC AAATCGAGTT CGTTGGTACG
GTAGAGAAGT CGTTTTACGC CAACCACATT GGTCACTTCG TGCTCACCTA CCACCTGCTC
GATCTGCTGA AAGCCGCCGG AGAGGCCCGT ATCATTAACC TGTCCTCGGC GGCCTATATG
TTGGGGAAAG CCTCCCGATT TTTTCAGCAC GACAAGAAGT TGTCTCTGCT GGCTGCCTAT
GGCGATGGCA AACTGGCTAA CGTGTTGTTT ACGAAAGAAT TGGCTACCCG CTATGCTGAT
TCGGGAATTA CGGCCTACGC GGTACACCCC GGCGTTGTCA AATCCAATTT TGGGAGCAAC
TTCACCGGCC CCATTCAGCT ACTTATGTCG GTAGCCAGGC CCTTTATGCG GAGCCCGGAG
CGGGGTGCCG AAACATCCGT TTATCTGGCC ACTGCACCCA TTGATGTAAT TACCCGGAAG
GATGGGAAAG CCGGTGGCTC GGGCGGCTTC TTTGCCGATT CAGCCCCTAA GCTGGTAAAA
CATATCGATA ACACAAATCG GCAGGCGGCT GATCTTTGGG AAAAAAGTAT GGCGTTTGTC
TAG
|
|---|
| Protein sequence | MKTALITGAN VGIGLATAKA LARQGFNLIL LCRNEAKGEE AVTAIKRINP AVTVELVLAD
LTDTDSIRRA AEQVRATHRQ LDVLINNAGY SPDQIEFVGT VEKSFYANHI GHFVLTYHLL
DLLKAAGEAR IINLSSAAYM LGKASRFFQH DKKLSLLAAY GDGKLANVLF TKELATRYAD
SGITAYAVHP GVVKSNFGSN FTGPIQLLMS VARPFMRSPE RGAETSVYLA TAPIDVITRK
DGKAGGSGGF FADSAPKLVK HIDNTNRQAA DLWEKSMAFV
|
|---|
| |