Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0173 |
Symbol | |
ID | 8723901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 209371 |
End bp | 210291 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003385037 |
Protein GI | 284035107 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.854745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000000557216 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGAATAC TCTCCCTACT TACTTCACTC CTACTCACCT ACGTCACCAC CTACGGGCAA GATGTCCGGT TCACCTTCGA AGGCGACTCC ATTACCACGC CCTTCGTTCA GGATAGTTTG CGGGGTATAT CGGGGCTGGA GATCGTACCA ACTACGGGTG AGTGGCATTT GGTGAGCGAC CGGGGGTGGC ATTTTATCTT TACCAACATT CGCAGCATCC GCGATCTGGG CGATGGCTCT CACCTGAAAT CAGCCGGGAA AACACCCTAC TGGTTTGAGA GTGCCCGGTA TGATGCCAAA GGCGGAATGT ACTTCTGGAC CGATGAGCAC GAGCACGTAA CCTCCATACA ATACGGCAAA GCCATTCGCG ATAGTGCCGC TCAAACAATC TTAAAAATAC CCCTCCCCGC CCCTAACAAA GGACTCGAAG GATTAGCCAT TATGCCATCT GGCGCGCTCT GGGTGGCTCC CGAAGCAGGT TGGGAAGGCG AAACCAATTT GAATCAGGAC ACGATTACGT TTTTTCAGTA CCCCAACCCG CTGGATGCCG ACCCCGTTGT AGCGCGTTAC AAATACCGTA TCGACCGTTG TCTGTTCGCT CAGGGCGAAG AACGAACGGG TGGCATTTCC GAAATAGTAG CCCTCGATGA CCGGCGGCTA CTAATACTGG AACGGTGTTA TGATAATACA CAGAAACGGG TAACGGCAAA TCTGTATCTG GCCACACCCG ACGAAATAAC CCATACTCTG CGGAAAGAGC TGGCGTTTGA TTTTAATCGC CAATTTCCGG GCAATGTCTG CAATCTGGAA GCGATGGCTT GGGCCGATGA ATCGCATCAG ACGCTGATCC TCATGGCCGA TGATAATTTC CGGGTCAACA AAACACTGCG CAATCAGGTC ATCGTTTTGA AAAGACGGTA G
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Protein sequence | MRILSLLTSL LLTYVTTYGQ DVRFTFEGDS ITTPFVQDSL RGISGLEIVP TTGEWHLVSD RGWHFIFTNI RSIRDLGDGS HLKSAGKTPY WFESARYDAK GGMYFWTDEH EHVTSIQYGK AIRDSAAQTI LKIPLPAPNK GLEGLAIMPS GALWVAPEAG WEGETNLNQD TITFFQYPNP LDADPVVARY KYRIDRCLFA QGEERTGGIS EIVALDDRRL LILERCYDNT QKRVTANLYL ATPDEITHTL RKELAFDFNR QFPGNVCNLE AMAWADESHQ TLILMADDNF RVNKTLRNQV IVLKRR
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