Gene Slin_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0173 
Symbol 
ID8723901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp209371 
End bp210291 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385037 
Protein GI284035107 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.854745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000557216 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGAATAC TCTCCCTACT TACTTCACTC CTACTCACCT ACGTCACCAC CTACGGGCAA 
GATGTCCGGT TCACCTTCGA AGGCGACTCC ATTACCACGC CCTTCGTTCA GGATAGTTTG
CGGGGTATAT CGGGGCTGGA GATCGTACCA ACTACGGGTG AGTGGCATTT GGTGAGCGAC
CGGGGGTGGC ATTTTATCTT TACCAACATT CGCAGCATCC GCGATCTGGG CGATGGCTCT
CACCTGAAAT CAGCCGGGAA AACACCCTAC TGGTTTGAGA GTGCCCGGTA TGATGCCAAA
GGCGGAATGT ACTTCTGGAC CGATGAGCAC GAGCACGTAA CCTCCATACA ATACGGCAAA
GCCATTCGCG ATAGTGCCGC TCAAACAATC TTAAAAATAC CCCTCCCCGC CCCTAACAAA
GGACTCGAAG GATTAGCCAT TATGCCATCT GGCGCGCTCT GGGTGGCTCC CGAAGCAGGT
TGGGAAGGCG AAACCAATTT GAATCAGGAC ACGATTACGT TTTTTCAGTA CCCCAACCCG
CTGGATGCCG ACCCCGTTGT AGCGCGTTAC AAATACCGTA TCGACCGTTG TCTGTTCGCT
CAGGGCGAAG AACGAACGGG TGGCATTTCC GAAATAGTAG CCCTCGATGA CCGGCGGCTA
CTAATACTGG AACGGTGTTA TGATAATACA CAGAAACGGG TAACGGCAAA TCTGTATCTG
GCCACACCCG ACGAAATAAC CCATACTCTG CGGAAAGAGC TGGCGTTTGA TTTTAATCGC
CAATTTCCGG GCAATGTCTG CAATCTGGAA GCGATGGCTT GGGCCGATGA ATCGCATCAG
ACGCTGATCC TCATGGCCGA TGATAATTTC CGGGTCAACA AAACACTGCG CAATCAGGTC
ATCGTTTTGA AAAGACGGTA G
 
Protein sequence
MRILSLLTSL LLTYVTTYGQ DVRFTFEGDS ITTPFVQDSL RGISGLEIVP TTGEWHLVSD 
RGWHFIFTNI RSIRDLGDGS HLKSAGKTPY WFESARYDAK GGMYFWTDEH EHVTSIQYGK
AIRDSAAQTI LKIPLPAPNK GLEGLAIMPS GALWVAPEAG WEGETNLNQD TITFFQYPNP
LDADPVVARY KYRIDRCLFA QGEERTGGIS EIVALDDRRL LILERCYDNT QKRVTANLYL
ATPDEITHTL RKELAFDFNR QFPGNVCNLE AMAWADESHQ TLILMADDNF RVNKTLRNQV
IVLKRR