Gene Slin_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0161 
Symbol 
ID8723889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp201770 
End bp202201 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function DUF1094 
Protein accessionYP_003385026 
Protein GI284035096 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000296731 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000000231799 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTATCCTC CTCATTTGCT TATCCCGATG CGGGAAGACC TGACCAGTGT CGGGTTTGAA 
GAATTGACCA CCGCCGACGA CGTGGTAAAC GCCGTGGAAA ATACCGAAGG TACTATGCTG
GTCGTAGTAA ACTCGGTTTG CGGTTGCGCA GCCGGTGCGG CTCGTCCAGG CGTAAAAGCA
GCGTTAGCGG CTAGCCCGGT AAAACCCGAC AAAATGGTGA CCGTTTTTGC GGGTGGCGAC
CTCGAAGCAA CCGCCAAGAT GCGGGAATAT CTGTTGCCTT ATCCGCCATC GTCGCCAGCC
ATTGGTATTT TCAAAGATGG TGAACTCGTT CATTTTATTG AGCGGCACCA CATCGAAGGC
CGTTCGGCGC AGATGATCGC CCAGCACCTC GAAATGGCGC TGGAAGAGTT CTGCACCCCT
GCAAACGCGT AA
 
Protein sequence
MYPPHLLIPM REDLTSVGFE ELTTADDVVN AVENTEGTML VVVNSVCGCA AGAARPGVKA 
ALAASPVKPD KMVTVFAGGD LEATAKMREY LLPYPPSSPA IGIFKDGELV HFIERHHIEG
RSAQMIAQHL EMALEEFCTP ANA