| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0138 |
|---|
| Symbol | |
|---|
| ID | 8723866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 167068 |
|---|
| End bp | 168030 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | transglutaminase domain protein |
|---|
| Protein accession | YP_003385007 |
|---|
| Protein GI | 284035077 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.792413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGGC TGCTGATTCT GGCTTTGATG GCTGCCAGCA CGCCACCCCC ACGCACACGC
ACGGTTCACT TCAGCTACAA AGCGGTGATT GGCGAGCTAC CCGCCGGAAC CCGGCAAGTC
GACATCTGGA TACCGGTTCC CCGCAGCAGC GCATTTCAGC AAATTTCGGA CTTGACTGTT
GTCTCGCCTT ATCCCTATCA GTTCGACACG GCTCAGTACG GCAACCGGGT GATGCATTTG
CATTTGCAAA AGCCACCGGA AAAAGAGTTT TCGGTGGCTA TGCAGTTTAC GGCTACCCGA
AAAGAGCACA TTCAACCGCA GCAGCCAACG GGTAATGCCG GAGCAAAGCG CCCCATTGAC
CCGTATATGA AACGCTGGCT ACAGCCCGAC CGGCTGGTCC CCATCGATGG ATCGATTAAA
CGGTGGGCCA GGGCTGTTGT CGATTCGGCG GGGGCAAAAA CAGACTTACA GCGGGCAAGA
GCCATCTACA ATCACGTTAT TGCCACGGTC AAATACGATA AAACCGGTAC GGGCTGGGGA
CGGGGAGATA TTTATTACGC CTGCGATACC CGTCGGGGAA ACTGCACCGA TTTTCACGCC
ATCTTTATCG GCTACTGCCG GGCGTTGGGT ATACCTGCCC GCTTCGCCAT CGGGTTTTCC
TTACCCACCG ACCGTCCCGC CGGTCAGGTG AGCGGTTACC ACTGCTGGGC TGAATTTTAT
AGCAAAGACC TGGGCTGGGT GCCCATCGAC GCGTCGGAAG CAGCCAAGAA CCCCGCCCGG
CGGGCCTATT TCTTCGGGGC TCACGATGAA AACCGGATTG AATTTAGTCT GGGTCGTGAT
CTGCTCCTGT ACCCTGGGCA GGCCCAGCCA TTGAACTACT TTATTTACCC GCTGGTCGTT
GCTGACGGAC AGCCGCTTAC CCCTGTAGTA CCCGCCATCA CCTACCGTAA CGCTGGCCCT
TAA
|
|---|
| Protein sequence | MGGLLILALM AASTPPPRTR TVHFSYKAVI GELPAGTRQV DIWIPVPRSS AFQQISDLTV
VSPYPYQFDT AQYGNRVMHL HLQKPPEKEF SVAMQFTATR KEHIQPQQPT GNAGAKRPID
PYMKRWLQPD RLVPIDGSIK RWARAVVDSA GAKTDLQRAR AIYNHVIATV KYDKTGTGWG
RGDIYYACDT RRGNCTDFHA IFIGYCRALG IPARFAIGFS LPTDRPAGQV SGYHCWAEFY
SKDLGWVPID ASEAAKNPAR RAYFFGAHDE NRIEFSLGRD LLLYPGQAQP LNYFIYPLVV
ADGQPLTPVV PAITYRNAGP
|
|---|
| |