Gene Slin_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0083 
Symbol 
ID8723811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp98650 
End bp99873 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003384955 
Protein GI284035025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.240195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC TTCTCGGACA CCTGGGTTAC TGTACCAATA TTCATACGGG CGAAACCTGG 
ACAGACCACT TTGCCGCCCT GCAACAAGCC ATACCAGCGC TGAAACAGCG GCTTTCGCCT
GATGCGCCCT TTGGCATTGG ATTGCGGCTG TCTAACATAG CCAGTGAAGA GCTGGAAATT
CCCGAAAACC TGGTCGCCTT TCAGCACTGG CTGGCCGAAA ACGAGTGTTA CGTCTTCACC
ATGAATGGCT TCCCCTTCGG TGGCTTTCAT GATACCGCCG TCAAAGATCA GGTGCATACA
CCCGACTGGA CTACCGAGGC AAGGGTCGAG TACACCAAAC GGCTGTTCCG GATTTTGTCG
GTGCTGCTGC CAGTCGATGA GTTGGGCAAT GGCATACAGG GGGGCGTATC TACCTCACCC
CTCTCCTACC GGCATTGGTT CGAGTGGGAT CAACCGGCGG CCCGCGATTA TATCTATTCC
CAGACGACCC AGAATGTCCT CGAAGTAGTT GCAGACCTGA TCCGGTTACG TCGGCAGACC
GACCGGCTTA TGCACCTCGA TCTGGAGCCC GAACCGGACG GCGTTATCGA AACATCCGAC
GAGTTTATCA GCTGGTTTAC GGACTATCTG CTGCCCATGG GTATCGACCA GTTCAGTACC
GAATTTGGCC TGACTGATGA AGAAGCCGAA GCTACCATCT GCGAACACGT TCGGTTATGC
TACGACGTTT GCCATTTTGC GGTAGGCTAC GAACGGGCCG CTGATGTACT GGACAAACTC
AGAAGTTATG GTCTGCGCGT CGGTAAAATT CAGATCAGTG CCGCTTTAAA AGCTGAGTTT
CCGGCTGATC CAGCGGGACG ACAGGCGGTC CGGCAGGCGT TTGAGCAGTT TAACGAACCT
ACGTACCTGC ATCAGGTGGT AGCCCGAACA AAATCCGGTG CCTTGCTCCG CTACCCGGAC
TTACCCGAAG CGCTGGCCGC GCTGGACGAC ACCCATGCCG AATGGCGGGC GCACTTCCAC
GTTCCGCTGT TTGTATCGGA CTATGGTGTG TTGCAGTCTA CACAGGATGA CATCCGGGAA
GTACTTCAGT TGCAGGCCGA ACGGCGCTTT ACGAACCAGA TGGAAGTAGA AACCTACACC
TGGGGCGTGC TACCGGACGA ATTGAAAAAA GAGCTGATTG ATTCGATTGA ACGAGAAGTG
AAGTGGGTTC AACAATTCCC TTGA
 
Protein sequence
MKTLLGHLGY CTNIHTGETW TDHFAALQQA IPALKQRLSP DAPFGIGLRL SNIASEELEI 
PENLVAFQHW LAENECYVFT MNGFPFGGFH DTAVKDQVHT PDWTTEARVE YTKRLFRILS
VLLPVDELGN GIQGGVSTSP LSYRHWFEWD QPAARDYIYS QTTQNVLEVV ADLIRLRRQT
DRLMHLDLEP EPDGVIETSD EFISWFTDYL LPMGIDQFST EFGLTDEEAE ATICEHVRLC
YDVCHFAVGY ERAADVLDKL RSYGLRVGKI QISAALKAEF PADPAGRQAV RQAFEQFNEP
TYLHQVVART KSGALLRYPD LPEALAALDD THAEWRAHFH VPLFVSDYGV LQSTQDDIRE
VLQLQAERRF TNQMEVETYT WGVLPDELKK ELIDSIEREV KWVQQFP