| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0025 |
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| Symbol | |
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| ID | 8723753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 27147 |
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| End bp | 28484 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003384898 |
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| Protein GI | 284034968 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00511907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTAACAG CCCTCCCTAG TACTTATCCG CCCACACTAA GCCGAAGTCG GTGGCTGCGT
TATACTGTAT TTTTTTACCT GTATGTGATG CAGGGAATCC CGGCTGGTTT TTCGCTGACA
GCCCTGGCCA ACTATCTCAC CGCTGAAGGC GTGAAGCCGT CGGTTATTGG TTCATTTGCC
GCTATTGTTG GCCTGCCCTG GGCCTTTCAG TTTGTGTGGG GTCCGCTAAT CGACCGCTAT
CAGGGTTCTC CGATGGGCCG CCGAAAACCC TGGGTTGTGG GCGCACAATT TCTGGCGTTT
CTGGCATCGC TGAGTCTTTT GTTTGTTCAT AATCCCGTTA CACAGATTAC CACGCTGGCC
TGGCTTTTTT TCACCCACAG CATCTTTGCG GCTGTTCAGG ATGCCAGTGT GGATGCGATG
GCGATTACGG TGATTGCCGA AGATGAGCGG GGGCGCGTTA ACGCCTTCAT GCGGGCGGGC
TTCCTGATTG GTACCGGCGT TGGAGCCGCC GTATTTTCGC AGCTACTGCG TACGTATGGT
TTCTTTAACG CAGCCCTCAG TCAATCCCTT TGCCTGCTGA CGTTAACGAT CATTACTTTT
TTTATCCGCG AACAACCCGA CGACCAGTTG CTGCCGTCGT TTAAATCATC TACTACAGCC
AAGCCCAACA CGGCCCAGCG GGCAACCTTG CCTGAGCACA AATTCAAATG GCTGTTTACG
GAGTTATTCA AAGGCCTCTT CTCCACACGA AGCCTGCTTT TGTTCGGGGC TATCGTTGTC
GCCTACGTGA GCATAAGCCT GTTTTCGAGA GCCTACAGCT ACCAACTGAT TCGCGTTTTG
GGCTGGGCCG ACACGTCTGT ATCCGTGCTA ACCGGCACGT ACGGCATGCT CGTAGCCACG
GGAGCCGCAC TGATGGGTGG TTACATTGCC GACCGAATCA GTCCCCGTCG GCTCCTTGTC
GTGGTACTGA CCGTAGTGGC CGTTTATCTG ATCTGTTTCA ATGGTCTGGC AATGTACTGG
ACGCAACGAC CGGTGGCGCA AACGGGGCTT GTAGCGCTGT ATTTTATGGA CCCTAGTATC
AGCGTTGCGG CCATGCCTGT GTTGATGGCT ATCTGCCGAA AAGGGGTGGA AGGGTCACAG
TTTACCACGT ATATGGCCTT TGTTAACCTA TCCGACATTC TTGGCTCCTA CGTATCGGGC
CACGCCCTGG ATTATATCTC AGCCCCAACC ATAGGCCTTC TTGCGGGAGG ATTGGCCACC
GTGGCAGCGG TTACTATCTT CCTCACCGTA CGGCATTACA GCCTGCGGGA GACTACCGGC
GGGCAACCGC TGACCTAG
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| Protein sequence | MVTALPSTYP PTLSRSRWLR YTVFFYLYVM QGIPAGFSLT ALANYLTAEG VKPSVIGSFA
AIVGLPWAFQ FVWGPLIDRY QGSPMGRRKP WVVGAQFLAF LASLSLLFVH NPVTQITTLA
WLFFTHSIFA AVQDASVDAM AITVIAEDER GRVNAFMRAG FLIGTGVGAA VFSQLLRTYG
FFNAALSQSL CLLTLTIITF FIREQPDDQL LPSFKSSTTA KPNTAQRATL PEHKFKWLFT
ELFKGLFSTR SLLLFGAIVV AYVSISLFSR AYSYQLIRVL GWADTSVSVL TGTYGMLVAT
GAALMGGYIA DRISPRRLLV VVLTVVAVYL ICFNGLAMYW TQRPVAQTGL VALYFMDPSI
SVAAMPVLMA ICRKGVEGSQ FTTYMAFVNL SDILGSYVSG HALDYISAPT IGLLAGGLAT
VAAVTIFLTV RHYSLRETTG GQPLT
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