| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_37460 |
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| Symbol | |
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| ID | 8635379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 4187239 |
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| End bp | 4188903 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003316463 |
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| Protein GI | 269797008 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0616549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.720711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACA ACCCGTCGCT GCACCGTCAC GACACGACCG ACCCCATCAC CCCGAGCACG
ACGACGAGTG CGCGCTCGAG CAAGAGCGAG CCCACCACGC CGTCGAGCAC CACCCCGCCG
ACGGGGAGCG CCACCACGCC TCCGCCGCGC GCCGGCCGTC GGGCCTGGCT CGGGCTCGCC
GCGCTCATGC TCCCGGTCCT GCTGGTGAGC ATCGACAACA CCGTCCTGTC CTTCGCCATC
CCGCAGCTGA GCCAGGCGCT CTCGCCGACC GCGAGCCAGC TCTTGTGGAT CGTCGACATC
TACCCGCTCA TGCTCGCCGG CCTGCTGGTC ACCATGGGCA CCCTCGGCGA CCGCGTCGGC
CGTCGTCGGC TGCTGCTCAT CGGCGCGACC GGCTTCGGTG CCGTGAGCGT CTACGCCGCC
TTCGCCGGTG ACGCCTCGCA CCTCATCGCC GCGCGCGCCC TGCTCGGGCT CTTCGGCGCC
ACCCTGATGC CGTCGACCCT CGCGCTGCTG CGCAACCTCT TCCTCGACGA CAACCAGCGG
CGCCTCGCGA TCGCCATCTG GGCCTCGGCG TTCTCCGCGG GCTCTGCCCT CGGGCCGATC
GTCGGCGGCT GGCTGCTCGA GCACTTCTGG TGGGGCTCGA TCTTCCTCAT CAACGTCCCC
GTGCTCGTCG TCCTGCTGGT CGTCGCACCG TTCCTGCTGC CCGAGTCCCG CAACCCTGGC
TCGGTGCGCC TCGACCCGGT GAGCGTCGTG CTCTCCGTCG TGTCGATGCT GCCCTTCGTC
TTCGGCATCA AGAAGCTCGC GTCCTCCGGC ATCAGCACCC TCGGCGTCGC GTCGCTGCTG
CTCGGCGTGG TCCTGGGCGT CGTGTTCGTC CGTCGCCAGG TGCGCTCACG CACCCCGCTG
CTCGAGGTCG GCCTGTTCAA GAACCGCGTG TTCTCGGCGT CGGTCCTCGC CAACTTCATG
GCGATCTTCT CGATCTCCGG CCTCATCTTC TTCGTGTCGC AGTACCTGCA GCTGGTGCTC
GACCTCTCGC CGATGGAGGC AGGGCTCTAC CTGCTCCCCG GTGCCGCCGC GACCGTCGTC
ATGGGCCTGG CAGCCGTCGT GCTCGCCCGC GTCGCGCCGA TCTGGCTGCT CATCCCCACC
GGTCTGCTGC TGGCGACCGC CGGGTACCTG CTCGGGACCA CCCTCACCGG GTCGTCCTCC
GTCGGCGTCA TCGTCGTGAT CTTCGTCCTC GTGGGCGGAG GCGCCGGGCT CGCCGAGACG
CTCACCAACG ACGCGATCCT CGCGTCCGTC CCACCCGAGC GAGCGGGAGC CGCGTCGGGC
ATCTCCGAGA CCGCGTACGA GCTCGGGGCG TCGCTCGGCG TCGCCATCCT CGGCAGCGTC
CTGGCCGCGG TCTACCGCAC CCGGCTCGAG CTCCCCGCAG GGCTCGACCC CGCCGTGGCC
GACCAGGCGC AGCAGACCCT CGGCGGCGCC GTGAGCGCCG CCGACGGTCT GCCCGCCGGT
CAGGCCGACG CGCTGCTCGA GGCCGCGCGG TCGGCCTTCG CCCACGGTGT CGACCTGACG
TCCGCGATCG GCGCCGTCCT CGCGTTCCTC ACCGCCGTGA GCATCGGCAT CGCGCTGCGC
TCGGCCCAGC GGGCGACGCG TCGCGCGGGG CTCGTCGAGG TCTGA
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| Protein sequence | MADNPSLHRH DTTDPITPST TTSARSSKSE PTTPSSTTPP TGSATTPPPR AGRRAWLGLA
ALMLPVLLVS IDNTVLSFAI PQLSQALSPT ASQLLWIVDI YPLMLAGLLV TMGTLGDRVG
RRRLLLIGAT GFGAVSVYAA FAGDASHLIA ARALLGLFGA TLMPSTLALL RNLFLDDNQR
RLAIAIWASA FSAGSALGPI VGGWLLEHFW WGSIFLINVP VLVVLLVVAP FLLPESRNPG
SVRLDPVSVV LSVVSMLPFV FGIKKLASSG ISTLGVASLL LGVVLGVVFV RRQVRSRTPL
LEVGLFKNRV FSASVLANFM AIFSISGLIF FVSQYLQLVL DLSPMEAGLY LLPGAAATVV
MGLAAVVLAR VAPIWLLIPT GLLLATAGYL LGTTLTGSSS VGVIVVIFVL VGGGAGLAET
LTNDAILASV PPERAGAASG ISETAYELGA SLGVAILGSV LAAVYRTRLE LPAGLDPAVA
DQAQQTLGGA VSAADGLPAG QADALLEAAR SAFAHGVDLT SAIGAVLAFL TAVSIGIALR
SAQRATRRAG LVEV
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