Gene Sked_36830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_36830 
Symbol 
ID8635316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4117153 
End bp4119090 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content75% 
IMG OID 
Productcell division protein FtsI/penicillin-binding protein 2 
Protein accessionYP_003316403 
Protein GI269796948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00463694 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.702417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCG CTGACGTCAT GACCTCGCCA CGCCTCCGTC GCCGACCACG GCTGTGGTCG 
TTCGGCGCCG CCACCCTCTC GACGGTCCTC GTGGTCGGCG GGCTCGCGGC GTGCAGCGAC
GAGCCCGACC CGCTCGCCGA GGCGACGACG CTCGCGACCG CGCTCGGCGA GGGCCTCGCC
GACGGCGACC TCTCCGGCAT CGCCTTCAGC GACGTGAGCG CCGACGAGGC GACCGCCTCG
CACGCCGCCG TCGTGGCCGC CGTCGCCGAC TCGCCGCACG ACGTCGAGCT CACCGAGGTG
GTCCTCGCCG ACGACGAGAC CAGCGGCACC GCGACCTACA CGCACACCTG GGACATCGCC
GGGAACCCCT GGACCTACGA CACCCAGGCG CCGCTGGCCC TGTACGAGGA CGTCTGGGAG
GCGCAGTGGG CGCCCGACCT CGTGGTCGAC GGCCTCGAGT CCGACGAGGT CCTGCGCCTG
AGCAGGACCA CCGCGCCGCG CGCCGACATC CTCGGCGCCG GCGACACGCC GATCGTCACG
CAGCGGCCGG TCAAGCGTGT GGGCGTCGAC AAGACGCGCG TCGAGCCGGC TGACCTCGAC
GGCACGGCCC GTGCGCTCGC GGAGCTCGCC CAGATCGACC CCGAGGCGTA CGCGGCCAAG
GTCGCCGGTG CCGGCGAGAA GGCCTTCGTC GACGCCGTCA CGCTGCGCGC CGAGGGCGGC
GCCTACGACT TCGACGCGAT GGCGGCGATC CCCGGCGTGC TGCTCATCGA CGGCACCCTG
CCGCTCGCCC CGACCCGCGA GTTCGCGAGC GACCTGCTCG GCCGCGCCGG GGAGGCCACC
GCAGAGATCG TCGAGGCCTC CGAGGGGACG ATCGCCGCCG GAGACGTCAC CGGGCTCTCC
GGCCTGCAGC GCCAGTACGA CGAGCAGCTG CGCGGCACCC CCGGCGTCGC TCTCGAGGCC
GTGAGCGAGG CGCGAGAGCC CCGCGTGCTG CTCGCCGAGG ACCCCGTCCC GGGCGAGCCG
CTGCGGACCA CCCTCGACGT CGGCGTCCAG GAGCTCGCCG ACTCCGTGCT CGTGGGCCAG
GAGGTGCCCG CCGCCATCGT CGCGATCCGG CCCTCGACCG GTGAGGTCCT CGCGTCGGCC
ACCGGTGCGG CCGGTACCGG GACGGCGACC ACCGCGATGT ACGCCCCGGG GTCGACCTTC
AAGGTGGTCA CCGCGCTCGC CCTGCTGCGC AACGGGCTCA CCCCGGACAC GCCGCTCGAC
TGCTCGGCCG AGGCCGTCGT CGACGGGCGG GCCTTCGTCA ACTACCCCGA CTACCCGGCG
GGGAAGTCCG GCGAGATCTC GCTGACCGAC GTCATCGCCA ACTCGTGCAA CACCGCGCTC
ATCAACGCCT CCGGGCAGGT GACGCAGGCC GACCTCGCGT CGGCGGGCGA GGCCCTCGGG
CTGGGGCTCG CGCAGCAGCC CGGCCCGGGA GTCTTCACCG GGTCGGTCCC GGCCGAGGCC
GAGGGGACCG AGCACGCCGC GTCCATGATC GGCCAGGGGC AGGTCCAGGC GTCGCCGGTG
GCGATGGCGA CCGTCGCCGC CTCCGTGGCC GCCGGGACCA CCGTGCGCCC GACCTTCCTG
GCGCAGGAGG CCGACCCGGT CGACTCCGAC CTGCCCGACG CCGCGGCAGC GCCGCTGACC
GCCGACGAGG CCGCCCAGCT CGGTGCGTTC ATGCGGGCCG TCGTGACCGA CGGCGGCGGC
AGCTTCTTGC TCGACGTCCC CGGAGAGCCT GTCGGGGCCA AGACCGGCAC CGCGCAGTAC
GGCGACGGCA GCACCAACCA CGCCTGGATG ATCGCGACCC AGGGCGACCT CGCGGTCGCT
GTGTTCGTCG AGACCGGCGA CTACGGGTCC ACGACGGCCG GTCCGCTGCT CGAGGCGTTC
CTCGTCGGGC TGGCCTGA
 
Protein sequence
MPAADVMTSP RLRRRPRLWS FGAATLSTVL VVGGLAACSD EPDPLAEATT LATALGEGLA 
DGDLSGIAFS DVSADEATAS HAAVVAAVAD SPHDVELTEV VLADDETSGT ATYTHTWDIA
GNPWTYDTQA PLALYEDVWE AQWAPDLVVD GLESDEVLRL SRTTAPRADI LGAGDTPIVT
QRPVKRVGVD KTRVEPADLD GTARALAELA QIDPEAYAAK VAGAGEKAFV DAVTLRAEGG
AYDFDAMAAI PGVLLIDGTL PLAPTREFAS DLLGRAGEAT AEIVEASEGT IAAGDVTGLS
GLQRQYDEQL RGTPGVALEA VSEAREPRVL LAEDPVPGEP LRTTLDVGVQ ELADSVLVGQ
EVPAAIVAIR PSTGEVLASA TGAAGTGTAT TAMYAPGSTF KVVTALALLR NGLTPDTPLD
CSAEAVVDGR AFVNYPDYPA GKSGEISLTD VIANSCNTAL INASGQVTQA DLASAGEALG
LGLAQQPGPG VFTGSVPAEA EGTEHAASMI GQGQVQASPV AMATVAASVA AGTTVRPTFL
AQEADPVDSD LPDAAAAPLT ADEAAQLGAF MRAVVTDGGG SFLLDVPGEP VGAKTGTAQY
GDGSTNHAWM IATQGDLAVA VFVETGDYGS TTAGPLLEAF LVGLA