Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_36110 |
Symbol | |
ID | 8635244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 4040737 |
End bp | 4041501 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003316331 |
Protein GI | 269796876 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.386443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGAGA CGATCCTCCC CACCTTCTCC TCTCTCGCGC GCCACGTCTG GCACTGGACG GTGGTCCGCG GGGTCCTCGC GATCATCTTC GGCGTGGTCG CGCTCGTCGC CCCGATCTCG ACGGCGGTCT CTCTCGCCGT CGTCGTCGCG GTGTTCGCCG TCGTCGACGG CATCTTCGAG ATCGTCGACG GGATCCGGCA CCGGGGCGCC GGTGGCGCCG GGCTGCGCAT CCTCCAGGGT GCGCTCACCC TGGCCTTCGG CGTGGTCCTC GTCGTCTGGC CCTCCATCAC GGCGCTCGCG ATCGTCTGGA CGATCGGGCT GTGGGCGGTC GTCGTCGGGA TCATCCAGGT GGTCGTCGCG CTGTCCCTGC GGAAGGTGGA GCGCAGCGGC TGGGGCTGGG GCGTGGTCTC CGGCCTGGTG TCGGTGATCT TCGGCGTCCT GCTCCTGGCC CGCCCGGGTG CCGGTCTGGT GTCGATCATC TGGGTCCTGG GTGTCTACGC GATCATGCTC GGCGTGCTGC TGGTCGGCTT CGGCCTGCAG GTCCGGCGCC TCGGCAAGGA GGCCGGGGCG GTCGCCGGCG AGACGCGCGA CGAGCACGGC GCGCGCGACA CCACCTCGGC TCCGCATCCC GACCGCTCCG CGGCGCACCT CGCGCCCGAG AGCACGGCGA CCGCGTCGGC CTCCGAGCGT GCTGCCGACC ACGTCCCGAG CCACCTCGCG GCACCGTCCG AGCCCGAGCC CACGAAGCCT GACGCCCCCG CCTGA
|
Protein sequence | MPETILPTFS SLARHVWHWT VVRGVLAIIF GVVALVAPIS TAVSLAVVVA VFAVVDGIFE IVDGIRHRGA GGAGLRILQG ALTLAFGVVL VVWPSITALA IVWTIGLWAV VVGIIQVVVA LSLRKVERSG WGWGVVSGLV SVIFGVLLLA RPGAGLVSII WVLGVYAIML GVLLVGFGLQ VRRLGKEAGA VAGETRDEHG ARDTTSAPHP DRSAAHLAPE STATASASER AADHVPSHLA APSEPEPTKP DAPA
|
| |