| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_36090 |
|---|
| Symbol | |
|---|
| ID | 8635242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 4038265 |
|---|
| End bp | 4039152 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | ABC-type multidrug transport system, ATPase component |
|---|
| Protein accession | YP_003316329 |
|---|
| Protein GI | 269796874 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00151864 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGC CGACCGAGCC TCAGGACCCG ATCGCACCGC GACCCACCTC AGGTCCGACG
CCGCCGCCAG GCCCTCCTGC GCCGGACCTC GGACCTGAAC CGGCCCTCGC ACCGCGACCC
ACCTACGCCT CCGGCCCGCC CGCCCTCTCG CTGCGCGGGC TGACCAAGAC CTTCGGGCAC
AAGGTGGCCG TCGCCGGGAT CTCCCTCGAC ATCCCCACCG GGTCGTTCTA CGGGCTCGTC
GGGCCCAACG GCGCAGGCAA GACGACGCTG CTCTCCATGG CCACCGGCCT CCTGCGCCCC
GACGCCGGCA CCGCGACCGT CTGCGGCGTC GACATGTGGG CCGACCCCTT CGAGGCCAAG
CGGCTGCTCG GCGTCCTGCC CGACGGCATG GCGATCTTCG ACCGGCTCAC CGGCACCCAG
CTCGTCACCT ACGCCGGCCT CCTGCGCGGC ATGGACCGCG AGACCGTCGC GAGCCGCACC
GCCGACCTCC TCGCGGTCCT CGACCTGCGC GAGGCCGCCG ACACGCTCGT CGTCGACTAC
TCGGCCGGCA TGACCAAGAA GATCACGCTC GCCGCCGCAC TCGTCCACGC CCCGCGGGTG
CTCGTCCTCG ACGAGCCCTT CGAGGCGGTC GACCCCGTCT CCGCGAGCCA CATCCGCGCC
ATCCTGTCCG ACTACGTCGC GAGCGGCGGC ACCGTCATCG TGTCGTCGCA CGTCATGGAC
CTGGTCCAGC GGATGTGCGA CCACGTCGCC GTGGTCGTCG ACGGACAGGT CCGCGCCGCC
GGGACCGTCG ACGAGGTCCG CGCCGGGCGG TCCCTCGAGG AGCGGTTCGT CGAGCTCGCC
GGCGGCCAGA CCAGCGGAGA GGGGCTGTCG TGGTTGCGCA GCTCGTGA
|
|---|
| Protein sequence | MTSPTEPQDP IAPRPTSGPT PPPGPPAPDL GPEPALAPRP TYASGPPALS LRGLTKTFGH
KVAVAGISLD IPTGSFYGLV GPNGAGKTTL LSMATGLLRP DAGTATVCGV DMWADPFEAK
RLLGVLPDGM AIFDRLTGTQ LVTYAGLLRG MDRETVASRT ADLLAVLDLR EAADTLVVDY
SAGMTKKITL AAALVHAPRV LVLDEPFEAV DPVSASHIRA ILSDYVASGG TVIVSSHVMD
LVQRMCDHVA VVVDGQVRAA GTVDEVRAGR SLEERFVELA GGQTSGEGLS WLRSS
|
|---|
| |