Gene Sked_35350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_35350 
Symbol 
ID8635168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3948815 
End bp3949486 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003316257 
Protein GI269796802 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.147408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGTGGG CAGCCTTCGT CCACGAACGG GGTCAGACCG TGTCAGAATC CGCGCAGCCG 
CCTCGCGAGC GGGGCTACGC CAAGGGGCGG GCGACCCGCG TCCAGATCGT CGAGGCCGCG
ATGGTCTTGT TCGGCGAGGT CGGGTACCGC TCGGCGTCGC TGCGCGAGAT CGCCTCGCGC
GTCGGCATCT CCCACCCGGG CCTCATCCAC CACTTCCCGA CCAAGGAGGT GCTGCTCGCC
GCCGTGCTCG AGCACCGCGA CGAGATGGAC GACTCCGAGC TGTCGGCCGA CCTGGCCTCG
GGCACCGGGC TCATGGACGC CGTCGTGCGC CTGGTCCGGC GCAACTCCGA GCGCCCCGGG
ATCGTCGAGC TCTTCACCAC GCTGGCCGCC GAGGCCACGG CCCCCGACCA CCCCGCGCAC
CAGTACTTCC GCGAGCGGTA CGCGACCACG CTCGCGCTGC TGACCCGCGA GCTCGAGACG
CTCCGCGCCG ACGGTGCGCT GCGCCCCTCC GTCGAGCCGG CGGCCGCGGC CCGCGCGCTC
ACCGCCCTCA TGGACGGGCT GCAGGTCCAG TGGCTGCTCG AGCGCGGTGC CGACGACCAG
GTCGACATGG CGGCCGTGAT GCGCGACGCC CTCGACCTGT ACGTGGTCGG CGCGGCAGAG
CGGCGAGACT GA
 
Protein sequence
MPWAAFVHER GQTVSESAQP PRERGYAKGR ATRVQIVEAA MVLFGEVGYR SASLREIASR 
VGISHPGLIH HFPTKEVLLA AVLEHRDEMD DSELSADLAS GTGLMDAVVR LVRRNSERPG
IVELFTTLAA EATAPDHPAH QYFRERYATT LALLTRELET LRADGALRPS VEPAAAARAL
TALMDGLQVQ WLLERGADDQ VDMAAVMRDA LDLYVVGAAE RRD