| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_34250 |
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| Symbol | |
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| ID | 8635058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 3825983 |
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| End bp | 3828535 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003316150 |
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| Protein GI | 269796695 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.137913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACCAGG GACGTGGACA GACCGACCGG CAGCCCCCAG GCGGGGTGGC GGGTGGGTCC
GGCGCGCCCG GGCGCAGCGC GAGAGGCCGG CTCCGGGGTG GTCTGGGACT GCCGGCGGGC
CGCACCCTCG ACCGTCTGAG CGACGAGGAG CTCGTCGCCC GTGCCCGTGC GCACGCCGCC
TCAGACACCT CCGCCCTCGA CCCCTTCGAC GTGCTGTGGC GTCGGCACGC CGACGCCGGC
CGCAGGGCGG CCGTGGGCAT CACCCGTGCG AGCGACCCTG ACGACCTGGT TCAGGAGGCC
TACCTGCGGA TCTACTCCGC GGTGAGCCGC GGCAAGGGGC CCGACGGGCC GTTCCGGCCG
TACCTGTACC AGTCGATCCG GAACATCGCA GCCACCTGGG CGGCGCGACC CCGCGACGAC
AGCGTCGACC TGATGCCTGA CCTCAGCGAC GGCACCGACA TCTCCGAGAC GGTCCTCGAG
GGCACCGTCA CCGCGACGGC GTTCCGGTCG CTGCCCGCAC GCTGGCAGGA GGTCCTCTGG
TACTCCGAGG TCGAAGGCCT GGAGCCTGCC GATATCGCGC CGATGCTCGC CCTCAGCCCG
AGCGCCGTGT CCGCCCTCGC GTACCGGGCG CGCGAAGGTC TGCGACGCGC CTGGCTGCAG
GCCCACGTGA GCTCGACGTC CCTGCCCGCA GGGTGCCGGT GGTCCGCCGA GCGGATGGGC
GACGCCCACC GCGGCGCGCT CAGCGGGACC GCCCGGGCAC GCTTCGACGA GCACGTCGAC
GGGTGCGCCC GGTGCACGAT CGTCCTCGGT GAGGTCGACG AGGTGTCCAA GCGCCTCGGG
CTCGTGCTCG TGCCGCTGCT CGTCGGGATG CCGTGGGCTG CGTTCCAGAC GATGACTGCC
GCGGGTGCTG GTCCTGCCGT CGGGTCCGGC ACTGCCGTGG GCGCGGGTGC TGCTGTGGGC
TCTGACGCCG CTATGGACTC AGGCGCTGCT GCGGGCTCAG GCGCGGCCTC GTCGTCCGTC
GGCTCGTCCC CCACGGCCGC CAGCCCCGTC CGTGCGCACG GCCGGAGCGC CGGCGCGACC
TCTCGACGTG TCGGCTCCGG TGCCCTGGCC GTGATGGTGG TCGCCGGGCT GGCGACGGTC
TCCGGTGCCG TGGTGCTCGC GTCGAACCTG GCCGGCGGGT CCGAGGTCGC TGCGGGGGCA
CCGCCGGCGC CCCCGAGCAC GACGTCGTCT CCGGCGTCCC CACCGGTCGG CGCGGTGCCG
TCCGAGGAGG GGACCGTCGA GGAACCGGTC GGCGACCCGG AGGACTCCCC GACGGTCGAG
GTGCCACCGG TCGCCCCCAC GAGACCCTGG CGCGAGATCC CTGATCCCCC GTCGACTCCC
GAGCCGCAGG AGCCGGCGGC CGTCCCCGCG CTCCCGACCC TGCCGCCGCT CGCGCCCTAC
GAGCCCTACG AACCGGCCGC TCCGACGGAT CCGACTGCTC CCTCCGAGCC GACGGACCCG
ACGGGCCCGT CGGAGCCGAC CGACCCCACG ACCGAGGTGC CCGACGTGAC AGGGCCCGCT
GTGCCGACGC TCACCGGCCC GCCCGCTGGT GTGCCGCTGA CGACCTTCCC GACGGTCTCC
GGGGTCGCGG ACCCCGGGGT CACCGTCGTG CTCACCACGG GCGACGGTGC GTCGTTGACG
ACCGCGGTCG CCGACGACGC GGGGGCGTGG TCGACACCGG TGTGCCCGGA CGTCACGGCA
GCACCCGGCG CCTGCCTGGC AGACGTCGCG ACGCTCGTGG TCCAGGCGCA CGCCCTCGAC
GAGAGCACCG GCCTGTCCTC CGAGGTGTCG GACGCGCTGG AGTGGGACTT CGAGAGGCCG
ACGCTCTCCG TGCCCGCCGA GGCCGGGCCG GTGGTGGCCG GGGACGTCTC GGTCCTGCTG
GAGGGAGCCG CCGGGCAGTA CGTCCAGGTG AGCATCGACG GTGTTCCGAC GGGCCGCTAC
CACCTCATGC CCCAGTCCAC CCCGCTCGTG TGGAGCGGCG CCACCCCCGG CGCGCACGCG
CTGAGCGTCA GGTACGTGAC GGTGACCGGG ACGGGCGACG CTGTGCGCGT CACGGGCTTC
GGTCCGAACC GCACGTCGAC CGTGGAGGTC GAGCCGCAGC CCGCCCCGCC GGGTGCGGTG
CCACCCGAGG AGGAGCCGGC GGGAGACGCG GCGGCGCCGC GGCAGCCTGG GGACGGGAAC
GCAGGAGACG TCTCCGCGGA CGACACCGCC CTGGTCGGCG AGGCGACAGT CGGCGAGACA
GGGGTCGGGG AAGCAGAGGG CGGCGAGAAA GCAGCAGGCG AGGCGACTGG TGGTGCACCA
GGAGCGGCTG GTCTCGCGCC GCCCGACGAG GCGACAGCTG ACGGAGCGAC GGCAGGAGCC
GTAGCCCGGG AGGGCTTGGA CGACATCCCG ACGGGATCGT CGGCCGACCC GCAGAAGTCC
GCGCCCGCAC CTGAGGTCAG TCCTGGGTCC GAGGCAGCGC CTGCACCAAC GCCATCGGAA
CCACATGGTG AGACGTTCGG GGAAACCCGC TGA
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| Protein sequence | MDQGRGQTDR QPPGGVAGGS GAPGRSARGR LRGGLGLPAG RTLDRLSDEE LVARARAHAA
SDTSALDPFD VLWRRHADAG RRAAVGITRA SDPDDLVQEA YLRIYSAVSR GKGPDGPFRP
YLYQSIRNIA ATWAARPRDD SVDLMPDLSD GTDISETVLE GTVTATAFRS LPARWQEVLW
YSEVEGLEPA DIAPMLALSP SAVSALAYRA REGLRRAWLQ AHVSSTSLPA GCRWSAERMG
DAHRGALSGT ARARFDEHVD GCARCTIVLG EVDEVSKRLG LVLVPLLVGM PWAAFQTMTA
AGAGPAVGSG TAVGAGAAVG SDAAMDSGAA AGSGAASSSV GSSPTAASPV RAHGRSAGAT
SRRVGSGALA VMVVAGLATV SGAVVLASNL AGGSEVAAGA PPAPPSTTSS PASPPVGAVP
SEEGTVEEPV GDPEDSPTVE VPPVAPTRPW REIPDPPSTP EPQEPAAVPA LPTLPPLAPY
EPYEPAAPTD PTAPSEPTDP TGPSEPTDPT TEVPDVTGPA VPTLTGPPAG VPLTTFPTVS
GVADPGVTVV LTTGDGASLT TAVADDAGAW STPVCPDVTA APGACLADVA TLVVQAHALD
ESTGLSSEVS DALEWDFERP TLSVPAEAGP VVAGDVSVLL EGAAGQYVQV SIDGVPTGRY
HLMPQSTPLV WSGATPGAHA LSVRYVTVTG TGDAVRVTGF GPNRTSTVEV EPQPAPPGAV
PPEEEPAGDA AAPRQPGDGN AGDVSADDTA LVGEATVGET GVGEAEGGEK AAGEATGGAP
GAAGLAPPDE ATADGATAGA VAREGLDDIP TGSSADPQKS APAPEVSPGS EAAPAPTPSE
PHGETFGETR
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