Gene Sked_34090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_34090 
Symbol 
ID8635042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3807779 
End bp3809326 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content70% 
IMG OID 
Productamidophosphoribosyltransferase 
Protein accessionYP_003316134 
Protein GI269796679 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.163094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCCCC GCGGAGATGG ACTTCTGAAC CACGACCTCA TGCCTGGCGA GAAAGGCCCC 
CAGGACGCTT GCGGCGTCTT CGGTGTCTGG GCTCCCGGCG AAGAGGTCGC CAAGCTTGCC
TACTTCGGGC TGTACGCGTT GCAGCACCGA GGGCAAGAAT CGGCCGGGAT CGCGACCAGC
AACGGTCAGC AGATCCTCGT CTACAAGGAC ATGGGACTCG TGTCCCAGGT GTTCGACGAG
ACCGCCCTCA ACGCCCTGAC CGGGCACATC GCGGTCGGGC ACTGCCGGTA CTCGACCACC
GGTGGTGTCA CCTGGGAGAA CGCCCAGCCG ACCCTCGGTG CGACGGCAGC CGGCACAGTG
GCCCTCGGGC ACAACGGCAA CCTCGTCAAC AGCGCCGAGC TCGTCGACCT CGTAGCCGAG
CGTTACGGCG CCCAGCGCCG CGGAGAGCTC GCCCGTGGCA ACACGACCGA CACGGCCCTG
GTCACCGCGC TGCTCGCGGG CGACGACGAC CACACCCTCG AGCAGACGGC CATGGAGGTC
CTCCCGCGCC TCCGCGGCGC CTTCAGCCTC GTCTTCATGG ACGAGAAGAC CCTCTACGCG
GCGCGCGACC CTCAGGGCGT CCGCCCGCTC GTCCTCGGTC GTCTCGACCG CGGCTGGGTC
GTCGCCAGCG AGACCCCTGC CCTCGACATC GTCGGCGCCA GCTTTGTCCG CGAGGTCGAG
CCCGGTGAGC TCATCGCCAT CGATGCCGAC GGCCTGCGGT CGCAGAAGTT CGCGACGCCC
GAGCGCGCCG GCTGCGTCTT CGAGTACGTG TACCTGGCCC GCCCGGACAC CAGCATCAAG
GGCCGCTCCG TCCACGCCGC CCGCGTCGAG ATGGGCCGTA CGCTCGCCCG CGAGCACCCC
GTCGAGGCGG ACCTCGTCAT CCCCGTCCCG GAGTCCGGCA CGCCGGCAGC CGTCGGGTAC
GCGCAGGAGT CCGGCATCCC CTTCGGCCAG GGCCTCATGA AGAACGCCTA CGTCGGCCGC
ACCTTCATCC AGCCGTCGGA CACCCTCCGC CAGCTGGGCA TCCGCCTCAA GCTCAACCCG
CTGCGCGACG TCATCAAGGG CAAGCGCCTC GTGGTCGTCG ACGACTCGAT CGTCCGCGGG
AACACGCAGC GCGCCCTCAT CCGCATGCTC CGCGAGGCCG GCGCCGCCGA GATCCACGTG
CGCATCAGCT CGCCGCCCGT CAAGTGGCCG TGCTTCTACG GCATCGACTT CGCGTCGCGC
GCCGAGCTCA TCGCCAACGG CCTCAGCCCC GCCGAGGTCG GCCAGTCGCT CGGCGCCGAC
ACCCTCGGGT ACATCACCGA GGAAGGCATG ATCGCCGCGA CCGAGCAGCC GAAGTCTCAG
CTCTGCAGCG CCTGCTTCAG CGGCACGTAC CCGATCGAGC TGCCCGACGC CGCTCGCCTC
GGCAAGAACC TCCTTGAGCA GGCCGAGCTC CCGCTCGGCG CGCCCGAGGA CGGCCTCTCG
ACGCTCACGG TCTCGGCCGG CGGCGCCAGC GCCCTGCAGC ACCCCTGA
 
Protein sequence
MAPRGDGLLN HDLMPGEKGP QDACGVFGVW APGEEVAKLA YFGLYALQHR GQESAGIATS 
NGQQILVYKD MGLVSQVFDE TALNALTGHI AVGHCRYSTT GGVTWENAQP TLGATAAGTV
ALGHNGNLVN SAELVDLVAE RYGAQRRGEL ARGNTTDTAL VTALLAGDDD HTLEQTAMEV
LPRLRGAFSL VFMDEKTLYA ARDPQGVRPL VLGRLDRGWV VASETPALDI VGASFVREVE
PGELIAIDAD GLRSQKFATP ERAGCVFEYV YLARPDTSIK GRSVHAARVE MGRTLAREHP
VEADLVIPVP ESGTPAAVGY AQESGIPFGQ GLMKNAYVGR TFIQPSDTLR QLGIRLKLNP
LRDVIKGKRL VVVDDSIVRG NTQRALIRML REAGAAEIHV RISSPPVKWP CFYGIDFASR
AELIANGLSP AEVGQSLGAD TLGYITEEGM IAATEQPKSQ LCSACFSGTY PIELPDAARL
GKNLLEQAEL PLGAPEDGLS TLTVSAGGAS ALQHP