Gene Sked_33950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_33950 
Symbol 
ID8635028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3798286 
End bp3799545 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003316123 
Protein GI269796668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.144001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.695383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTCC GTACCTTCGG GTGGTCCTTC GTCATCACCG CCCTCGCCCT CGTGACGGCA 
CTCCTCTACG GAGGGCCAGA GGCCCTCGTG CTCTGCCTGA TCCTCGCGGT CCTCGAGGTC
TCGCTGAGCT TCGACAACGC GGTGGTCAAC GCCAAGGTCC TCGAGCGCAT GAGCGAGGCC
TGGCAGAAGA TCTTCCTCAC CGTCGGCGTG CTCATCGCCG TGTTCGGCAT GCGGCTGGTG
TTCCCGCTGC TCGTCGTGAG CGTCACCGCC GGGCTGGGAC CGGTCGAGGC CGTGCGGCTC
GCGATGGCCA AGGGCGACGT CCACGAGCCG GGCAGCTACG GGTACATCCT CGCCGAGGCC
CACCCGCAGA TCGCGGCCTT CGGCGGGCTG TTCCTGCTCA TGCTGTTCCT CGACTTCGTC
TTCTCCGAGC GCGAGATCAC CTGGCTGTCC TGGATCGAGC GCCCGCTCGC CCGCGCAGGG
AAGCTCGCGA ACCTCTCCGT GGTGGTCGCC GCGATCGCCC TCGTCCTCGC CTCCGAGCTG
CTCGCCGAGG ACTCGCACAC CGTGCTGCTC GCCGGTGTGC TCGGCATGAT CACCTACCTG
GCCGTCAACG GGCTGGGCAG CCTCTTCGAG GACAGCCACG TGCTCGACGA CGACGCGACT
GCTGACGGTG TGCAGGAGCA GGAACCGGTC GCGCGCGCTG CGGCAGCGGG CGGTGCCGAC
GTGTCGACCG ATCCCAGGGC GCCGATCACC TCGGCCGCGC GGCCGACCGG CCCGACAGGT
CTGGCCAAGG CGACCGGCAA GGCCGGGTTC TTCCTGTTCC TCTACCTCGA GGTGCTCGAC
GCGTCGTTCT CCTTCGACGG CGTCATCGGT GCCTTCGCGA TCACCGCAGA CCCGATCATC
ATCGCCCTCG GGCTCGGGTT CATCGGCGCG ATGTTCGTCC GCTCGATCAC CATCTTCCTG
GTCCGCAAGG GCACGCTCGC CGAGTACGTG TACCTCGAGC ACGGCGCGCA CTGGGCCATC
GGGGCGCTCG CCACGATCCT GCTCCTGTCG ATCCACTGGC ACATCAACGA GGTCGTCACC
GGGCTCATCG GCGTCGTGTT CATCGGGGCC GCGTTCTGGT CCTCCGTGCG GCACCGCCGC
AGGGAGGGGC TGGACGGCGC GGCGCCCGAG GAGACCAGCA GCACCGACAG CGCCGGCGCC
GCTGACGAGC ACGCCGGTCC CACGGGCGGC ACGGGCACCT CGCACCCGAC GTCGGTCTGA
 
Protein sequence
MILRTFGWSF VITALALVTA LLYGGPEALV LCLILAVLEV SLSFDNAVVN AKVLERMSEA 
WQKIFLTVGV LIAVFGMRLV FPLLVVSVTA GLGPVEAVRL AMAKGDVHEP GSYGYILAEA
HPQIAAFGGL FLLMLFLDFV FSEREITWLS WIERPLARAG KLANLSVVVA AIALVLASEL
LAEDSHTVLL AGVLGMITYL AVNGLGSLFE DSHVLDDDAT ADGVQEQEPV ARAAAAGGAD
VSTDPRAPIT SAARPTGPTG LAKATGKAGF FLFLYLEVLD ASFSFDGVIG AFAITADPII
IALGLGFIGA MFVRSITIFL VRKGTLAEYV YLEHGAHWAI GALATILLLS IHWHINEVVT
GLIGVVFIGA AFWSSVRHRR REGLDGAAPE ETSSTDSAGA ADEHAGPTGG TGTSHPTSV