Gene Sked_33230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_33230 
Symbol 
ID8634956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3704139 
End bp3705365 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003316052 
Protein GI269796597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTCC CTACGGTCGA CCCCTCAGGC AGCCACTCGT GGCCGCCGAT CGGTCGCGAG 
GAGCTCGGGT GGACGTCGAC GATCCCCGTC GACCTGCTCT CTCGCAGGGC TCGCGACCGT
CTGCGCAACC CGTACATGGC GGCCGTGGTC CCGGAGATCG GCGACCTGAC CCCCTCCCTC
TCTCGGTCCG TCGCCGAGGC GGCGGAGGAC GCCACATCGG CGATCCGGGC CTTCGACGCC
GACTCGGGCC ACGACGTCGC CCCGTTCGCA GCGGTCCTGC TCCGGTCGGA GTCGGCCTCC
TCCTCGCAGA TCGAGAACAT CACCTCGGGC GCGAAGCAGA TCGCCCTCGC CGAGATCCAC
GAGGAGTCCC GGGCGAACGC CGCGCTCGTG GTGAGCAACG CGGACGCGAT GCGTGCAGCC
CTGGCACTCG CCGACGAGAT CTCCCCGGAC TCCGTCCTCG CCATGCATCG CGCGCTCCTC
GGGGCGAGCG CCCCGGACAT CGCCGGCCGC TGGCGTGACT CCGCGGTCTG GATCGGCGGG
AACGGATACT CGCCCCACGG AGCGTCGTTC GTCGCTCCCG CCGCCGGACG CGTGGTCCCG
GCGATCACGG ACCTGGTCCG CTTCTCCGCC AGGAACGACC TGCCGGCGCT GACCCAGGCC
GCCGTCGCCC ACGCGCAGTT CGAGACGATC CACCCGTTCC CGGACGGCAA CGGGCGGACG
GGTCGCGCCC TGGTGCACTC GATGCTGCGA CGGCGAGGAG TGACCCGCGC GGTGACCGTC
CCGGTGTCAG CGGGGCTGCT CACCGACACG GATCGGTACT TCGCTGCGCT CACGGCCTAC
CGCGAGGGCG ACGTCGACCC GATCGTCGAG ACGCTCGCAG ATGCCGCCAC GGCGTCCGTC
GCCAACGGGC GCCTCCTCGT CACCGACCTT CGAGAGCTTC GTCTGACGTG GGCGGACACG
ATCTCGGCAC GGTCCGACTC GTCCGTGTGG CGCATCGTCG ACCTGCTGCT CCGCCAGCCC
GTGATCAGCA CCGCCGTCGT CATGGACGCC GTGGGGATCA ACCACACGAA CGCCTCTCGG
GCGATCGACC GGCTCGTCAC CGCAGGTGTC CTCGCCGAGG TCGGAGGGCG CAGGCGGTCG
ATGCTCTGGC AGGCGACCGG CGTCCTCCAC GCGCTGGACG CCTTCGCGGC ACGCACGGGA
CGCCGGGCCG TGCCCGACCG GACCTAG
 
Protein sequence
MSLPTVDPSG SHSWPPIGRE ELGWTSTIPV DLLSRRARDR LRNPYMAAVV PEIGDLTPSL 
SRSVAEAAED ATSAIRAFDA DSGHDVAPFA AVLLRSESAS SSQIENITSG AKQIALAEIH
EESRANAALV VSNADAMRAA LALADEISPD SVLAMHRALL GASAPDIAGR WRDSAVWIGG
NGYSPHGASF VAPAAGRVVP AITDLVRFSA RNDLPALTQA AVAHAQFETI HPFPDGNGRT
GRALVHSMLR RRGVTRAVTV PVSAGLLTDT DRYFAALTAY REGDVDPIVE TLADAATASV
ANGRLLVTDL RELRLTWADT ISARSDSSVW RIVDLLLRQP VISTAVVMDA VGINHTNASR
AIDRLVTAGV LAEVGGRRRS MLWQATGVLH ALDAFAARTG RRAVPDRT