Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_32700 |
Symbol | |
ID | 8634903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 3640956 |
End bp | 3641771 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain |
Protein accession | YP_003315999 |
Protein GI | 269796544 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.442824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.485424 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACCCC AGGACCCCAC CTCTCGCGCA GCCCTCCCGC GTCTCACCCG CGCCGACGGC AGCCCGCTGC GCGTGCTCGT CGTCGACGAC GAGCCCAACC TCGCCGAGCT CCTCACCTCG GCGCTGCGCT ACGAGGGCTG GGACGTGTCG ACGGCCCTCG ACGGCCAGAC GGCCGTCCGC CTGGCCCGCG AGACCGTGCC CGACGTGATC GTCCTCGACA TCATGCTCGG TGACATCGAC GGCCTCGAGG TGCTCCGCCG CATCCGCCAG CAGCAGGAGG GCGTGCCGGT GCTGTTCCTC ACCGCCCGCG ACTCCGTGGA GGACCGCGTC GCGGGCCTCA CCGCGGGCGG CGACGACTAC GTGACCAAGC CCTTCAGCCT CGAGGAGGTC GTCGCCCGGC TGCGCGGCCT GCTGCGCCGG GCCGGGGCGA GCGCCGCCCG CGACGAGGCC CGGCTGGTGG TCGGCGACCT CACCCTCGAC GAGGACTCCC ACGAGGTGGA CCGTGCCGGC CAGGAGATCC ACCTCACCGC GACCGAGTTC GAGCTGCTGC GCTACCTCAT GCGCAACGCC CGACGCGTCA TGTCCAAGTC GCAGATCCTC GACCGCGTGT GGCAGTACGA CTTCGGCGGG CAGGCCAACA TCGTCGAGCT CTACATCTCG TACCTGCGTC GCAAGATCGA CGCCGGGCGC GAGCCCATGA TCCACACCCT CCGCGGCGTC GGCTACGTGC TCAAGCCGGC GGTGCTCACC TCCGAGCAGG CTGCCGCCAC CGCCCCCCGG GAGCCCGTCG CCGCGGGGAC AGAGCCGGCT GCGTGA
|
Protein sequence | MAPQDPTSRA ALPRLTRADG SPLRVLVVDD EPNLAELLTS ALRYEGWDVS TALDGQTAVR LARETVPDVI VLDIMLGDID GLEVLRRIRQ QQEGVPVLFL TARDSVEDRV AGLTAGGDDY VTKPFSLEEV VARLRGLLRR AGASAARDEA RLVVGDLTLD EDSHEVDRAG QEIHLTATEF ELLRYLMRNA RRVMSKSQIL DRVWQYDFGG QANIVELYIS YLRRKIDAGR EPMIHTLRGV GYVLKPAVLT SEQAAATAPR EPVAAGTEPA A
|
| |