Gene Sked_31880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_31880 
Symbol 
ID8634821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3548552 
End bp3549247 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content71% 
IMG OID 
Productresponse regulator with CheY-like receiver domain and winged-helix DNA-binding domain 
Protein accessionYP_003315918 
Protein GI269796463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGCA TCCTGGTGGT CGAGGACGAA GAGTCCTACC GCGAGCCGCT CACGTACCAG 
CTGACCCGCG AGGGCTACGA CGTCGTCGCG GTCGCCGACG GGGCAGCCGG GCTGGCGGCC
TACGACGAGG GCGGCGCGGA CCTCGTGCTC CTCGACCTCA TGCTCCCGGG CCTCTCGGGG
ACCGAGGTGT GCCGTGAGCT CCGTCAGCGC GGCGACGTCC CGGTCATCAT GCTCACCGCC
AAGGACGGCG AGATCGACAA GGTCGTCGGG CTCGAGCTGG GCGCCGACGA CTACGTGACC
AAGCCGTACT CCTTCCGCGA GCTGCTCGCC CGGGTGCGTG CCGTGCTCCG GCGCCGCCAG
CCCGCAGCAG CTGTCGACGA GGACGAGGCC GACGAGCTCG TCGGCTCCGG CCCGGTGCAG
ATGGACGTCG ACCGGCACGT GGTGACGGTC CGCGGCGAGC TCGTCTCGCT GCCGCTCAAG
GAGTTCGACC TCCTCGAGTT CCTGCTGCGC AACGCCGGCC GGGTCCTGAC CCGCGGGCAG
CTCATCGACC GTGTGTGGGG CTCGGACTAC GTGGGCGACA CCAAGACGCT CGACGTCCAC
GTCAAGCGCC TGCGCGCCAA GATCGAGACG GACCCGGCCT CGCCCGAGCT CCTGCTCACG
GTCCGCGGCC TCGGCTACAA GCTCGTCGAC GACTGA
 
Protein sequence
MTRILVVEDE ESYREPLTYQ LTREGYDVVA VADGAAGLAA YDEGGADLVL LDLMLPGLSG 
TEVCRELRQR GDVPVIMLTA KDGEIDKVVG LELGADDYVT KPYSFRELLA RVRAVLRRRQ
PAAAVDEDEA DELVGSGPVQ MDVDRHVVTV RGELVSLPLK EFDLLEFLLR NAGRVLTRGQ
LIDRVWGSDY VGDTKTLDVH VKRLRAKIET DPASPELLLT VRGLGYKLVD D