Gene Sked_30970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30970 
Symbol 
ID8634730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3446210 
End bp3447898 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content71% 
IMG OID 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_003315828 
Protein GI269796373 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC TGACGTCCGA CCACCGCGAG ACCGAGACCC CTGAGGGGCC CCTCGAGACC 
GACGCTCCCG CCGCCGCTGA GCCCGCCGCT CAGCGGCGCG GGGCGGGGGT CCGCGGGGTG
CGCCTCGGCC TGATGCAGCG CATCGGGGCG ATCATCGGCG CCTTCGTGCT CGTCATCGTC
ATCATCGGTG CGGTCGCGGT GACCACCACC CGGTCCATCT CGGACGACGC GAACCAGCTC
GCGGTCGTCC AGTCGGACAT CGTGGTGCCG CTCAACAAGA TCCACCAGGG CCAGCTCAAG
GCGCGGCTCA TCGTCGCGCA GATCGCCGCG GCGTCGAGCC AGAACCGGGT CAACGAGTGG
CTCGACAAGC AGGCCGAGAA CGACGACGAG ACGGACGTGG CGATCGCCGA GCTCCGCGCG
GCGCTGTTCC AGGACGGCTC CAGCGCGATC GTCGGGATCG ACAAGTTCCT CGAGTGGCGC
GACGTGCGCG ACGCCCAGAT CATCCCCGCC GCCCGTTCGG TCGACCGCAC CAAGTACGAG
GCGATCATCA CGCGGGTGTC CCAGCCGCTC ATCGACGAGT ACCTCGTCGA CCTCGACGCG
GGCGCGGCGG AGACCGAGGC ATACAGCACC GGGCTGGCCG ACACGGCCCG TTCCACGGGA
AACTCCGGCC TGGTCGTCAT CATCGTCGTG AGCCTCCTCG GGATCGCGGC CGGGGCCACC
ACCGGGATCC TCATCGCCCG GGCGATCACC CGGTCGACGG TCGCCGTGCA GCGGTCGCTC
GAGGCGCTCG CCGAGGGCGA CCTCACGGTC GAGCCGCACG TCACGTCGCG CGACGAGATC
GGTGCGATGG CGAGCGCGCT CGTCACCGCG CAGCGCAGCC TGCGCGACGT GCTCGGCGGG
GTGGCCGACT CGGCCCGCAA CGTCTCGGAC GCGGCGCAGG ACATGCGCGC CGGGGCCACC
CAGGTGACGA CCGGCTCGGA GGAGTCGAGC GCGCAGATCG GCGTGGTCGC CGCCGCGGCG
GAGCAGGTCT CCCGCAACGT CCAGACGGTC GCCGCGGGCG CCGAGCAGAT GGGCGCGTCC
ATCCGCGAGA TCGCCACCAA CGCCAACGAG GCCGCGAAGG TCGCGCACTC CGCGACGACC
GTGGCCGCTG CCACGAACGA CACGGTCGCC AAGCTCGGCA CCTCGAGCCA GGAGATCGGC
GCGGTCGTCA AGGTCATCAC GAGCATCGCG GAGCAGACCA ACCTGCTCGC CCTCAACGCG
ACCATCGAGG CTGCCCGTGC CGGCGAGGCC GGCAAGGGCT TCGCGGTCGT GGCCTCCGAG
GTCAAGGACC TCGCCCAGGA GACCGCCAAG GCGACCGAGG ACATCGCCCG GCGCGTCGAG
GCGATCCAGG TCGACACCCG CTCGGCCGTC GACGCCATCG CCGAGATCTC GTCGATCATC
GCGAGCATCA ACGACTACCA GCTGACCATC GCCTCGGCGG TCGAGGAGCA GACCGCCACG
ACCAACGAGA TGTCGCGCTC GGTGACCGAG GCCGCCACCG GCTCGGGCGA GATCGCGTCC
AACGCGGCCG GCGTCGCGCA GACCGCCGAG GTCTCGAACA TCGCGATCGC CGACCTCGGC
GGTCGTGTCG ACGACCTCGC CGGGATCGCG TCGGAGCTCC ACTCGAAGGT CTCGACCTTC
CGGTACTGA
 
Protein sequence
MTALTSDHRE TETPEGPLET DAPAAAEPAA QRRGAGVRGV RLGLMQRIGA IIGAFVLVIV 
IIGAVAVTTT RSISDDANQL AVVQSDIVVP LNKIHQGQLK ARLIVAQIAA ASSQNRVNEW
LDKQAENDDE TDVAIAELRA ALFQDGSSAI VGIDKFLEWR DVRDAQIIPA ARSVDRTKYE
AIITRVSQPL IDEYLVDLDA GAAETEAYST GLADTARSTG NSGLVVIIVV SLLGIAAGAT
TGILIARAIT RSTVAVQRSL EALAEGDLTV EPHVTSRDEI GAMASALVTA QRSLRDVLGG
VADSARNVSD AAQDMRAGAT QVTTGSEESS AQIGVVAAAA EQVSRNVQTV AAGAEQMGAS
IREIATNANE AAKVAHSATT VAAATNDTVA KLGTSSQEIG AVVKVITSIA EQTNLLALNA
TIEAARAGEA GKGFAVVASE VKDLAQETAK ATEDIARRVE AIQVDTRSAV DAIAEISSII
ASINDYQLTI ASAVEEQTAT TNEMSRSVTE AATGSGEIAS NAAGVAQTAE VSNIAIADLG
GRVDDLAGIA SELHSKVSTF RY