Gene Sked_30790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30790 
Symbol 
ID8634712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3427272 
End bp3428408 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content73% 
IMG OID 
Productphosphoserine aminotransferase 
Protein accessionYP_003315810 
Protein GI269796355 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.514499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGGCG ACGTGACTGC CACGCCAAGC ATCCCAGCCG CCCTCCTGCC CGCCGACGGC 
CGCTTCGGGA GCGGCCCGGG CAAGGTGCGC GACGCACAGC TCGATGCGCT CGCCGCGACG
GGGCGCAGCC TCCTCGGCAC GTCCCACCGC CAGCCCCCTG TGAAGGACCT CGTCGGCCGT
GTCCGGTCGG GCCTCTCCGA GCTGTTCTCC GTGCCGGACG GGTACGAGGT CATCCTCGGC
AACGGCGGCT CCACCGCCTT CTGGGACGCG GCCACCTTCT CCCTCGTGCG CGACCGCGCG
GCGCACGGGG TGTTCGGCGA GTTCGGCGCC AAGTTCTCGG CCGCGACCGC GGGCGCACCG
TTCCTCGAGC CCTCTGCTGT CACCACGGGA GCACCGGGCA CCGTCGCGCT GCCTGCCGCG
CACCCCGACG CCGACGTCTA CGCGTGGGCG CACAACGAGA CCTCGACCGG AGCGATGGCC
CCCGTGCGCC GCGTCGCCGG CGCCTCGGCC GACGCGCTCA CCGTCATCGA CGCGACCTCG
GGGGCCGGCG GGCTGCCCGT CGACATCTCC GAGACGGACG TCTACTACTT CGCGCCCCAG
AAGTCCTTCG CGTCGGACGG CGGCCTGTGG CTCGCCGTCG TGTCACCGGC GGCCGTCGAA
CGCATCGGCG AGATCGCGGT CAAAGGCCGG TGGATCCCCG AGTTCCTGTC GCTGCAGAAC
GCCGTGACGA ACTCTCGTGC GAACCAGACG CTCAACACCC CGGCGATCGC CACCCTGTTC
CTGCTCGGCG AGCAGGTGCG GTGGATGCTC GACCAGGGCG GCCTCGACTG GGCGGCGGCC
CGGACCGCCG AGTCGGCCGC GCACCTGTAC TCCTGGGCGG AGAGCCGCGA GTGGGCGACG
CCGTTCGTCG CCGACCCCGC CGACCGGTCG ACCGTCGTCG GCACGATCGA CCTCGACGAG
CGGGTCGACG CGACCGAGAT CGCCCGCGTC CTGCGCGCGC ACGGCGTCGT CGACGTCGAC
CCCTACCGCA AGCTCGGCCG CAACCAGCTC CGCGTCGCGA TGTTCCCCTC CGTCGACCCC
TCCGACGTCC AGGCCCTCAC CGCCTGCGTC GACCACCTCG TCGAGCACTC GGGCTGA
 
Protein sequence
MVGDVTATPS IPAALLPADG RFGSGPGKVR DAQLDALAAT GRSLLGTSHR QPPVKDLVGR 
VRSGLSELFS VPDGYEVILG NGGSTAFWDA ATFSLVRDRA AHGVFGEFGA KFSAATAGAP
FLEPSAVTTG APGTVALPAA HPDADVYAWA HNETSTGAMA PVRRVAGASA DALTVIDATS
GAGGLPVDIS ETDVYYFAPQ KSFASDGGLW LAVVSPAAVE RIGEIAVKGR WIPEFLSLQN
AVTNSRANQT LNTPAIATLF LLGEQVRWML DQGGLDWAAA RTAESAAHLY SWAESREWAT
PFVADPADRS TVVGTIDLDE RVDATEIARV LRAHGVVDVD PYRKLGRNQL RVAMFPSVDP
SDVQALTACV DHLVEHSG