Gene Sked_30230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_30230 
Symbol 
ID8634657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3361184 
End bp3361696 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003315757 
Protein GI269796302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.178176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCG CTGAGGTCCG CGAGGACGAG GTCGACCGCA TCATCGCGGC CTGGGGCCGC 
GCGCGGCCCG ACCTCGACGT GTCCCCGCTC GCCGTCCTGT CCCGCGTCTC GCGGCTGGAC
CGGCACCTGG ACCTCGCCCG GCGCGGCGCC TTCGCCCGAC ACCAGCTCGA GCCGTGGGAG
TTCGACGTCC TCGCCGCGCT GCGGCGGGCC GGCGAGCCCC ACGTGCTCTC CCCCGGTGCG
CTCGTCACCC AGACGATGGT GACGAGCGGC ACCATGACCA ACCGCATCGA CCGGCTCGCC
TCGCGCGGGC TGGTCGAGCG GGCTCCCTCG CCGGACGACC GGCGGGGAGT CCTCGTCCGG
CTCACCGACG ACGGGCTCGC CCGTGTCGAC GCGGCGTTCA GCGACCTGCT GGCCGTCGAG
CACGAGGTCC TCACGGTCCT CGACCCGGCG GACGAGCCCG CCATCACCGA CCTGCTGCGA
CGGCTGGTCG CACAGTTCGA CACCCTCGGC TGA
 
Protein sequence
MSSAEVREDE VDRIIAAWGR ARPDLDVSPL AVLSRVSRLD RHLDLARRGA FARHQLEPWE 
FDVLAALRRA GEPHVLSPGA LVTQTMVTSG TMTNRIDRLA SRGLVERAPS PDDRRGVLVR
LTDDGLARVD AAFSDLLAVE HEVLTVLDPA DEPAITDLLR RLVAQFDTLG