Gene Sked_29790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_29790 
Symbol 
ID8634613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3304449 
End bp3306551 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content64% 
IMG OID 
Producttranslation elongation factor 2 (EF-2/EF-G) 
Protein accessionYP_003315715 
Protein GI269796260 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.527454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACAGG ACGTGCTCAC CGACCTGAAC AAGGTCCGCA ACATCGGCAT CATGGCCCAC 
ATCGACGCCG GCAAGACGAC GACCACCGAG CGGATCCTGT TCTACACCGG GGTCAACTAC
AAGATCGGTG AGACCCACGA CGGCGCATCG ACGACTGACT GGATGGAGCA GGAGAAGGAG
CGCGGCATCA CCATCACGTC CGCGGCCGTG ACCTGCTTCT GGAACAAGAA CCAGATCAAC
ATCATCGACA CCCCCGGCCA CGTGGACTTC ACGGTCGAGG TGGAGCGCTC GCTCCGCGTC
CTCGACGGCG CTGTCGCCGT CTTCGACGGC AAGGAGGGCG TCGAGCCCCA GTCCGAGACC
GTCTGGCGCC AGGCCGACAA GTACAACGTC CCCCGCATCT GCTTCGTCAA CAAGATGGAC
AAGCTGGGCG CGGACTTCTA CTTCACCGTC GACACCATCG TCAACCGCCT CAAGGCGAAG
CCGCTGGTCA TCCAGCTGCC CATCGGGTCC GAGAGCGAGT TCACCGGCGT GGTGGACCTG
CTCGAGATGA AGGCTCTCAT GTGGCGCGGA GAGACCAAGA TGGGCGAGGC GTACACGACC
GAGGAGATCC CGGCCGACCT CCTGGAGAAG GCGCAGCAGT ACCGCGCCCA GCTCATCGAG
GACGTCGCCG AGTCGAGCGA AGAGCTCCTC GAGAAGTACC TGGGCGGCGA AGAGGTCACG
ATCCCCGAGA TCAAGACCGC GATCCGCGCG CTCACCGTCG CCGGCGAGGC CTTCCCGGTC
CTCTGCGGCT CGGCGTTCAA GAACAAGGGC GTCCAGCCCA TGCTCGACGC CGTCATCGAC
TACCTCCCGT CGCCCCTCGA CGTGCCGGCC ATCGACGCCC ACGACGTGCG TGACTTCGAG
AAGGTCATCG AGCGCCACCC CGACGCCACG GAGCCGTTCG CGGCTCTCGC GTTCAAGGTC
GCGGCCCACC CGTTCTTCGG CAAGCTGACC TACGTCCGCG TGTACTCCGG CAAGGTCGAG
CCCGGCGCAC AGCTCCTCAA CTCCTCCAAG GGGAAGAAGG AGCGCCTGGG CAAGATCTTC
CAGATGTACT CCAACAAGGA GAACCCGGTC GCCTCGGCGA GCGCGGGACA CATCTACGCG
GTCATCGGCC TCAAGGACAC CACGACCGGT GACACCCTCA CCGACGTGTC GAGCCCGGTC
GTCCTCGAGT CGATGACCTT CCCGGAGCCC GTCATCGACG TGGCCATCGA GCCGAAGACG
AAGGCCGACC AGGAGAAGCT CTCGGTCGCC ATCCAGAAGC TCGCCGAAGA GGACCCGACC
TTCCGCGTCA AGCTCGACGA CGAGACCGGC CAGACCGTCA TCGGCGGCAT GGGCGAGCTC
CACCTCGACA TCCTCGTCGA CCGTATGCGT CGCGAGTTCA ACGTCGAGGC CAACGTCGGC
AAGCCGCAGG TCGCGTACCG CGAGACGATC CGCCGCACGG CGGAGAAGAT CGACTACACG
CACAAGAAGC AGACCGGTGG ATCGGGTCAG TTCGCCAAGG TGCAGGTCAC CTTCGAGCCC
CTCGAGACGA CCGACGGCGA GCTGTACCAG TTCGTCAACG CTGTCACGGG TGGTCGTATC
CCTCGCGAGT ACATCCCCAG CATCGACGCC GGTATCCAGG CGGCGATGAA CCAGGGTGTC
CTCGCAGGCT TCCCGCTCGT GGGCGTCAAG GCCACGGTCA TCGACGGCGC GTACCACGAC
GTGGACTCGT CCGAGATGGC GTTCAAGATT GCCGGCTCGA TGGTCCTCAA GGAGGGCGTC
AAGCGGGCTG ACCCGGTTAT CCTTGAGCCG GTCATGGCAG TTGAGGTCCG TACTCCTGAG
GAGTACATGG GTGACGTCAT CGGCGACATC AACTCGCGAC GCGGGATGAT CCAGTCGATG
GAGGACGCTA CCGGCGTCAA GGTCATCCGG GCCCAGGTGC CGTTGTCAGA GATGTTCGGG
TACATCGGAG ACCTGCGGTC GAAGACCCAG GGTCGTGCGG TGTACTCGAT GCAGTTCGAC
AGCTACTCCG AGGTTCCTCG GAACGTTGCC GAAGAGATCA TCAAGAAGAC CCGGGGCGAG
TGA
 
Protein sequence
MAQDVLTDLN KVRNIGIMAH IDAGKTTTTE RILFYTGVNY KIGETHDGAS TTDWMEQEKE 
RGITITSAAV TCFWNKNQIN IIDTPGHVDF TVEVERSLRV LDGAVAVFDG KEGVEPQSET
VWRQADKYNV PRICFVNKMD KLGADFYFTV DTIVNRLKAK PLVIQLPIGS ESEFTGVVDL
LEMKALMWRG ETKMGEAYTT EEIPADLLEK AQQYRAQLIE DVAESSEELL EKYLGGEEVT
IPEIKTAIRA LTVAGEAFPV LCGSAFKNKG VQPMLDAVID YLPSPLDVPA IDAHDVRDFE
KVIERHPDAT EPFAALAFKV AAHPFFGKLT YVRVYSGKVE PGAQLLNSSK GKKERLGKIF
QMYSNKENPV ASASAGHIYA VIGLKDTTTG DTLTDVSSPV VLESMTFPEP VIDVAIEPKT
KADQEKLSVA IQKLAEEDPT FRVKLDDETG QTVIGGMGEL HLDILVDRMR REFNVEANVG
KPQVAYRETI RRTAEKIDYT HKKQTGGSGQ FAKVQVTFEP LETTDGELYQ FVNAVTGGRI
PREYIPSIDA GIQAAMNQGV LAGFPLVGVK ATVIDGAYHD VDSSEMAFKI AGSMVLKEGV
KRADPVILEP VMAVEVRTPE EYMGDVIGDI NSRRGMIQSM EDATGVKVIR AQVPLSEMFG
YIGDLRSKTQ GRAVYSMQFD SYSEVPRNVA EEIIKKTRGE