Gene Sked_29470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_29470 
Symbol 
ID8634581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3283636 
End bp3284043 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content70% 
IMG OID 
ProductSSU ribosomal protein S11P 
Protein accessionYP_003315683 
Protein GI269796228 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0093892 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCCA AGACTCGCGG CGCCCAGAGC GCACGCAAGC CTCGCCGCAA AGACAAGAAG 
AACGTCGCCA TCGGCCAGGC GCACATCAAG AGCACCTTCA ACAACACCAT CGTGTCCATC
ACGGACCCGA CCGGTGCGGT CATCTCCTGG GCCTCCTCGG GCCAGGTCGG CTTCAAGGGT
TCGCGCAAGT CGACCCCGTT CGCCGCGCAG CTCGCCGCCG AGGCCGCTGC CCGCCGCGCG
CAGGAGCACG GCATGAAGAA GGTCGACGTC TTCGTCAAGG GCCCCGGCTC CGGGCGCGAG
ACCGCGATCC GCTCCCTCCA GGCCGCCGGC CTCGAGGTGG GCTCGATCCA GGACGTCACC
CCCCAGGCGC ACAACGGCTG CCGGCCGCCC AAGCGCCGTC GCGTCTGA
 
Protein sequence
MPPKTRGAQS ARKPRRKDKK NVAIGQAHIK STFNNTIVSI TDPTGAVISW ASSGQVGFKG 
SRKSTPFAAQ LAAEAAARRA QEHGMKKVDV FVKGPGSGRE TAIRSLQAAG LEVGSIQDVT
PQAHNGCRPP KRRRV