Gene Sked_28970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_28970 
Symbol 
ID8634531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3237645 
End bp3238904 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315633 
Protein GI269796178 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA CGACCATCCG CAAGACCTCT CGCCGTGCCG CGTTCCTCGC GGTGCCGCTC 
CTCTGCCTCG GCCTGCTCAC CGCAGGCCCG GCATCTGCCG CACAGTGGGA CACTTCCCCG
ACCTCCCCCG GTGTCATCGC GACCGGGTCG TCGGCGACCG TGGTCCCCGG AGGCGACCTG
CGCGTCGACG TGATCTTCGG TGACGCCAGC ACGTGGCCCG CCGAGGGCCT CTTCGCCACC
GTCATCTACA CGCCAGCTGG TGGCGGAACC CCGGTTCCGC TCGCGTCCCA GCTGCCGATG
ACGGCGGACC GTGGTGTCAC CCTCACGGCA CCGCTCGGCC TGACCACCAC CGACCAGAGC
GGCATGGCGG CTCCGGTCGG GACCGTCACG ACGACCGTCA CTGACGCGGC TGGGGTCCCG
CTGACGAACT TCGGTGGTGC CTGGACGGCT GCGGCTGACC CGGCTTGGGG ATGGGCGGCC
ACGGAGAACG TCGTGCCGAC CTGCCTGACG GCGGTGCCCG AGTTCGCTCA CGCGAACGGC
GGCGGCGTGC GCATGGCCGG AGCACCGTCC GGCCCGTCCT GCGAGGACGG TCCGTCTGAG
ATCCAGACCA TCGCCGGACC GACGGACGTG ACGGTCCAGC CGACGTCTCC TCTCATGGCG
CGGTTCGTCG GCGGTGAAAC TGTCATCGCG ACCGTCACCT CTGAGTCGGG GGACGTCGTC
GGGCGCGGTG AGTGGGTCTA CGACGGCCTG ACGCGCAACA CGGTGGTCAA CACCCCTGCG
GAGCTCTCTG GGCTCTCCAC GGGCACGTAC ACCGTCACCT GGACGGGAGC CTCGACCTAC
GCGGACGGGG CGAGCTTCAC GGACTTCGCC GTGCAGCAGT CTTTCCGCTA CGTGCTCGAC
GGTGAAGTGC CGGCTGAGCC TGTCGACCCT GAGGTGCCTG TCACCCCGGT CGACCCGGTT
GACCCTGAGG TCCCTGTCAT CCCGGCGGAC CCCGAGGCAC CGGCCGAGCA GCCAGTTCCC
GTCGAGCCCG AGGTCGCGCC GGAGCAGCCT GCCCCGGCCG TCGTGACCGA GGTCGAGACC
ACCCCGGTCG CGCCCGAGGT CGCTCCGACT CGGGCCACGC CCCAGGTCGT CATCCAGGCG
GGTCTGGCCG AGGAGCCCGG TACCCCCGTC GCCGGGATCG TCTCCGGCGG CGCACTGGTC
GCAGGCGCTG GGATCCTCGG CGCCATGGCC GTCAGCAGGC GTCTCTCGGA GGGTCTGTGA
 
Protein sequence
MTSTTIRKTS RRAAFLAVPL LCLGLLTAGP ASAAQWDTSP TSPGVIATGS SATVVPGGDL 
RVDVIFGDAS TWPAEGLFAT VIYTPAGGGT PVPLASQLPM TADRGVTLTA PLGLTTTDQS
GMAAPVGTVT TTVTDAAGVP LTNFGGAWTA AADPAWGWAA TENVVPTCLT AVPEFAHANG
GGVRMAGAPS GPSCEDGPSE IQTIAGPTDV TVQPTSPLMA RFVGGETVIA TVTSESGDVV
GRGEWVYDGL TRNTVVNTPA ELSGLSTGTY TVTWTGASTY ADGASFTDFA VQQSFRYVLD
GEVPAEPVDP EVPVTPVDPV DPEVPVIPAD PEAPAEQPVP VEPEVAPEQP APAVVTEVET
TPVAPEVAPT RATPQVVIQA GLAEEPGTPV AGIVSGGALV AGAGILGAMA VSRRLSEGL